Protein–RNA interactions for Protein: Q9Y2S0

POLR1D, DNA-directed RNA polymerases I and III subunit RPAC2, humanhuman

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1DQ9Y2S0 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
POLR1DQ9Y2S0 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
POLR1DQ9Y2S0 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
POLR1DQ9Y2S0 MME-217ENST00000616757 1315 ntTSL 5 BASIC16.53■□□□□ 0.24
POLR1DQ9Y2S0 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC16.53■□□□□ 0.24
POLR1DQ9Y2S0 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
POLR1DQ9Y2S0 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
POLR1DQ9Y2S0 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC16.53■□□□□ 0.24
POLR1DQ9Y2S0 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC16.53■□□□□ 0.24
POLR1DQ9Y2S0 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC16.53■□□□□ 0.24
POLR1DQ9Y2S0 MFAP1P1-201ENST00000442257 1255 ntBASIC16.53■□□□□ 0.24
POLR1DQ9Y2S0 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC16.53■□□□□ 0.24
POLR1DQ9Y2S0 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
POLR1DQ9Y2S0 AC113410.3-201ENST00000623366 203 ntBASIC16.53■□□□□ 0.24
POLR1DQ9Y2S0 MYC-208ENST00000641036 567 ntBASIC16.53■□□□□ 0.24
POLR1DQ9Y2S0 AL049637.2-201ENST00000641778 930 ntBASIC16.53■□□□□ 0.24
POLR1DQ9Y2S0 AC068587.9-201ENST00000641814 219 ntBASIC16.53■□□□□ 0.24
POLR1DQ9Y2S0 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
POLR1DQ9Y2S0 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
POLR1DQ9Y2S0 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
POLR1DQ9Y2S0 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
POLR1DQ9Y2S0 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC16.53■□□□□ 0.24
POLR1DQ9Y2S0 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
POLR1DQ9Y2S0 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
POLR1DQ9Y2S0 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
POLR1DQ9Y2S0 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
POLR1DQ9Y2S0 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
POLR1DQ9Y2S0 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC16.53■□□□□ 0.24
POLR1DQ9Y2S0 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
POLR1DQ9Y2S0 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
POLR1DQ9Y2S0 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
POLR1DQ9Y2S0 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
POLR1DQ9Y2S0 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC16.53■□□□□ 0.24
POLR1DQ9Y2S0 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC16.53■□□□□ 0.24
POLR1DQ9Y2S0 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
POLR1DQ9Y2S0 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
POLR1DQ9Y2S0 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
POLR1DQ9Y2S0 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
POLR1DQ9Y2S0 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC16.52■□□□□ 0.24
POLR1DQ9Y2S0 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC16.52■□□□□ 0.24
POLR1DQ9Y2S0 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
POLR1DQ9Y2S0 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC16.52■□□□□ 0.24
POLR1DQ9Y2S0 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC16.52■□□□□ 0.24
POLR1DQ9Y2S0 MTMR9LP-203ENST00000426597 1545 ntBASIC16.52■□□□□ 0.24
POLR1DQ9Y2S0 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
POLR1DQ9Y2S0 MIR718-201ENST00000390190 70 ntBASIC16.52■□□□□ 0.24
POLR1DQ9Y2S0 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC16.52■□□□□ 0.24
POLR1DQ9Y2S0 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC16.52■□□□□ 0.24
POLR1DQ9Y2S0 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
POLR1DQ9Y2S0 PENK-204ENST00000518770 863 ntTSL 2 BASIC16.52■□□□□ 0.24
POLR1DQ9Y2S0 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC16.52■□□□□ 0.24
POLR1DQ9Y2S0 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC16.52■□□□□ 0.24
POLR1DQ9Y2S0 GRAP-204ENST00000573099 846 ntTSL 3 BASIC16.52■□□□□ 0.24
POLR1DQ9Y2S0 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC16.52■□□□□ 0.24
POLR1DQ9Y2S0 AC233702.5-201ENST00000584107 538 ntBASIC16.52■□□□□ 0.24
POLR1DQ9Y2S0 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC16.52■□□□□ 0.24
POLR1DQ9Y2S0 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC16.52■□□□□ 0.24
POLR1DQ9Y2S0 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC16.52■□□□□ 0.24
POLR1DQ9Y2S0 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
POLR1DQ9Y2S0 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC16.52■□□□□ 0.24
POLR1DQ9Y2S0 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC16.52■□□□□ 0.23
POLR1DQ9Y2S0 AC126763.1-201ENST00000552015 2118 ntBASIC16.52■□□□□ 0.23
POLR1DQ9Y2S0 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
POLR1DQ9Y2S0 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
POLR1DQ9Y2S0 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
POLR1DQ9Y2S0 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.23
POLR1DQ9Y2S0 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
POLR1DQ9Y2S0 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
POLR1DQ9Y2S0 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
POLR1DQ9Y2S0 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
POLR1DQ9Y2S0 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
POLR1DQ9Y2S0 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
POLR1DQ9Y2S0 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC16.51■□□□□ 0.23
POLR1DQ9Y2S0 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
POLR1DQ9Y2S0 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
POLR1DQ9Y2S0 COMP-202ENST00000425807 2292 ntTSL 2 BASIC16.51■□□□□ 0.23
POLR1DQ9Y2S0 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
POLR1DQ9Y2S0 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
POLR1DQ9Y2S0 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC16.51■□□□□ 0.23
POLR1DQ9Y2S0 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
POLR1DQ9Y2S0 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
POLR1DQ9Y2S0 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
POLR1DQ9Y2S0 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
POLR1DQ9Y2S0 ENSA-205ENST00000361532 792 ntTSL 2 BASIC16.51■□□□□ 0.23
POLR1DQ9Y2S0 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
POLR1DQ9Y2S0 AC097488.1-201ENST00000507834 756 ntBASIC16.51■□□□□ 0.23
POLR1DQ9Y2S0 REXO2-216ENST00000544196 452 ntTSL 3 BASIC16.51■□□□□ 0.23
POLR1DQ9Y2S0 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC16.51■□□□□ 0.23
POLR1DQ9Y2S0 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
POLR1DQ9Y2S0 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC16.51■□□□□ 0.23
POLR1DQ9Y2S0 USP36-216ENST00000589424 970 ntTSL 5 BASIC16.51■□□□□ 0.23
POLR1DQ9Y2S0 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC16.51■□□□□ 0.23
POLR1DQ9Y2S0 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
POLR1DQ9Y2S0 ADK-206ENST00000541550 2222 ntTSL 2 BASIC16.51■□□□□ 0.23
POLR1DQ9Y2S0 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
POLR1DQ9Y2S0 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.51■□□□□ 0.23
POLR1DQ9Y2S0 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
POLR1DQ9Y2S0 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
POLR1DQ9Y2S0 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
POLR1DQ9Y2S0 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms