Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
LRCH1Q9Y2L9 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC17.58■□□□□ 0.4
LRCH1Q9Y2L9 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.57■□□□□ 0.4
LRCH1Q9Y2L9 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRCH1Q9Y2L9 REXO1L9P-201ENST00000604264 2108 ntBASIC17.57■□□□□ 0.4
LRCH1Q9Y2L9 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRCH1Q9Y2L9 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LRCH1Q9Y2L9 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
LRCH1Q9Y2L9 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
LRCH1Q9Y2L9 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRCH1Q9Y2L9 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRCH1Q9Y2L9 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
LRCH1Q9Y2L9 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC17.57■□□□□ 0.4
LRCH1Q9Y2L9 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC17.57■□□□□ 0.4
LRCH1Q9Y2L9 CD44-222ENST00000526025 1052 ntTSL 2 BASIC17.57■□□□□ 0.4
LRCH1Q9Y2L9 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC17.57■□□□□ 0.4
LRCH1Q9Y2L9 MFSD11-216ENST00000590393 1141 ntBASIC17.57■□□□□ 0.4
LRCH1Q9Y2L9 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LRCH1Q9Y2L9 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.57■□□□□ 0.4
LRCH1Q9Y2L9 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRCH1Q9Y2L9 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
LRCH1Q9Y2L9 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17.57■□□□□ 0.4
LRCH1Q9Y2L9 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRCH1Q9Y2L9 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRCH1Q9Y2L9 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRCH1Q9Y2L9 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
LRCH1Q9Y2L9 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC17.57■□□□□ 0.4
LRCH1Q9Y2L9 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.57■□□□□ 0.4
LRCH1Q9Y2L9 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRCH1Q9Y2L9 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRCH1Q9Y2L9 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRCH1Q9Y2L9 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRCH1Q9Y2L9 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC17.56■□□□□ 0.4
LRCH1Q9Y2L9 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRCH1Q9Y2L9 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRCH1Q9Y2L9 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LRCH1Q9Y2L9 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRCH1Q9Y2L9 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRCH1Q9Y2L9 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.56■□□□□ 0.4
LRCH1Q9Y2L9 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRCH1Q9Y2L9 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRCH1Q9Y2L9 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRCH1Q9Y2L9 CDCA4P2-201ENST00000441182 718 ntBASIC17.56■□□□□ 0.4
LRCH1Q9Y2L9 AC026185.1-201ENST00000445748 174 ntBASIC17.56■□□□□ 0.4
LRCH1Q9Y2L9 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC17.56■□□□□ 0.4
LRCH1Q9Y2L9 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC17.56■□□□□ 0.4
LRCH1Q9Y2L9 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LRCH1Q9Y2L9 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
LRCH1Q9Y2L9 SLC7A5P1-201ENST00000568957 537 ntBASIC17.56■□□□□ 0.4
LRCH1Q9Y2L9 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC17.56■□□□□ 0.4
LRCH1Q9Y2L9 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC17.56■□□□□ 0.4
LRCH1Q9Y2L9 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRCH1Q9Y2L9 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRCH1Q9Y2L9 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LRCH1Q9Y2L9 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC17.56■□□□□ 0.4
LRCH1Q9Y2L9 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRCH1Q9Y2L9 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRCH1Q9Y2L9 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRCH1Q9Y2L9 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
LRCH1Q9Y2L9 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
LRCH1Q9Y2L9 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
LRCH1Q9Y2L9 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LRCH1Q9Y2L9 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRCH1Q9Y2L9 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRCH1Q9Y2L9 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRCH1Q9Y2L9 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
LRCH1Q9Y2L9 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
LRCH1Q9Y2L9 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
LRCH1Q9Y2L9 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRCH1Q9Y2L9 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRCH1Q9Y2L9 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
LRCH1Q9Y2L9 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LRCH1Q9Y2L9 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC17.55■□□□□ 0.4
LRCH1Q9Y2L9 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRCH1Q9Y2L9 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
LRCH1Q9Y2L9 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
LRCH1Q9Y2L9 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.55■□□□□ 0.4
LRCH1Q9Y2L9 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRCH1Q9Y2L9 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRCH1Q9Y2L9 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRCH1Q9Y2L9 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LRCH1Q9Y2L9 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC17.55■□□□□ 0.4
LRCH1Q9Y2L9 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC17.55■□□□□ 0.4
LRCH1Q9Y2L9 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC17.55■□□□□ 0.4
LRCH1Q9Y2L9 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LRCH1Q9Y2L9 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
LRCH1Q9Y2L9 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
LRCH1Q9Y2L9 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
LRCH1Q9Y2L9 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC17.55■□□□□ 0.4
LRCH1Q9Y2L9 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC17.55■□□□□ 0.4
LRCH1Q9Y2L9 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.55■□□□□ 0.4
LRCH1Q9Y2L9 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRCH1Q9Y2L9 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC17.55■□□□□ 0.4
LRCH1Q9Y2L9 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRCH1Q9Y2L9 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC17.55■□□□□ 0.4
LRCH1Q9Y2L9 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRCH1Q9Y2L9 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LRCH1Q9Y2L9 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC17.55■□□□□ 0.4
LRCH1Q9Y2L9 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.55■□□□□ 0.4
LRCH1Q9Y2L9 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms