Protein–RNA interactions for Protein: Q9Y261

FOXA2, Hepatocyte nuclear factor 3-beta, humanhuman

Predicted RBP Predictions only

Length 457 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA2Q9Y261 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
FOXA2Q9Y261 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC14.97□□□□□ -0.01
FOXA2Q9Y261 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
FOXA2Q9Y261 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
FOXA2Q9Y261 AC008040.2-201ENST00000461049 708 ntBASIC14.97□□□□□ -0.01
FOXA2Q9Y261 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC14.97□□□□□ -0.01
FOXA2Q9Y261 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC14.97□□□□□ -0.01
FOXA2Q9Y261 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
FOXA2Q9Y261 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
FOXA2Q9Y261 AL355075.4-201ENST00000554988 638 ntBASIC14.97□□□□□ -0.01
FOXA2Q9Y261 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC14.97□□□□□ -0.01
FOXA2Q9Y261 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
FOXA2Q9Y261 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC14.97□□□□□ -0.01
FOXA2Q9Y261 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC14.97□□□□□ -0.01
FOXA2Q9Y261 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC14.97□□□□□ -0.01
FOXA2Q9Y261 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC14.97□□□□□ -0.01
FOXA2Q9Y261 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
FOXA2Q9Y261 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC14.97□□□□□ -0.01
FOXA2Q9Y261 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
FOXA2Q9Y261 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
FOXA2Q9Y261 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
FOXA2Q9Y261 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
FOXA2Q9Y261 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
FOXA2Q9Y261 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC14.97□□□□□ -0.01
FOXA2Q9Y261 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC14.97□□□□□ -0.01
FOXA2Q9Y261 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
FOXA2Q9Y261 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
FOXA2Q9Y261 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC14.96□□□□□ -0.01
FOXA2Q9Y261 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.01
FOXA2Q9Y261 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.01
FOXA2Q9Y261 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC14.96□□□□□ -0.01
FOXA2Q9Y261 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC14.96□□□□□ -0.01
FOXA2Q9Y261 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
FOXA2Q9Y261 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
FOXA2Q9Y261 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
FOXA2Q9Y261 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
FOXA2Q9Y261 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
FOXA2Q9Y261 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
FOXA2Q9Y261 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
FOXA2Q9Y261 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC14.96□□□□□ -0.01
FOXA2Q9Y261 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
FOXA2Q9Y261 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
FOXA2Q9Y261 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
FOXA2Q9Y261 MFAP1P1-201ENST00000442257 1255 ntBASIC14.96□□□□□ -0.01
FOXA2Q9Y261 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
FOXA2Q9Y261 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
FOXA2Q9Y261 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC14.96□□□□□ -0.01
FOXA2Q9Y261 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC14.96□□□□□ -0.01
FOXA2Q9Y261 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC14.96□□□□□ -0.01
FOXA2Q9Y261 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC14.96□□□□□ -0.01
FOXA2Q9Y261 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
FOXA2Q9Y261 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC14.96□□□□□ -0.01
FOXA2Q9Y261 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
FOXA2Q9Y261 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
FOXA2Q9Y261 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC14.96□□□□□ -0.01
FOXA2Q9Y261 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
FOXA2Q9Y261 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC14.96□□□□□ -0.01
FOXA2Q9Y261 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
FOXA2Q9Y261 RCC2P3-201ENST00000418112 1537 ntBASIC14.96□□□□□ -0.02
FOXA2Q9Y261 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
FOXA2Q9Y261 AC096733.2-201ENST00000609937 1394 ntBASIC14.96□□□□□ -0.02
FOXA2Q9Y261 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
FOXA2Q9Y261 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC14.96□□□□□ -0.02
FOXA2Q9Y261 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC14.96□□□□□ -0.02
FOXA2Q9Y261 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
FOXA2Q9Y261 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
FOXA2Q9Y261 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
FOXA2Q9Y261 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
FOXA2Q9Y261 AC005332.8-201ENST00000622750 2735 ntBASIC14.95□□□□□ -0.02
FOXA2Q9Y261 GATB-213ENST00000515812 1893 ntTSL 5 BASIC14.95□□□□□ -0.02
FOXA2Q9Y261 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
FOXA2Q9Y261 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
FOXA2Q9Y261 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
FOXA2Q9Y261 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
FOXA2Q9Y261 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
FOXA2Q9Y261 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
FOXA2Q9Y261 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
FOXA2Q9Y261 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
FOXA2Q9Y261 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC14.95□□□□□ -0.02
FOXA2Q9Y261 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
FOXA2Q9Y261 CRYGFP-201ENST00000418459 633 ntBASIC14.95□□□□□ -0.02
FOXA2Q9Y261 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC14.95□□□□□ -0.02
FOXA2Q9Y261 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC14.95□□□□□ -0.02
FOXA2Q9Y261 CKBP1-201ENST00000565489 1086 ntBASIC14.95□□□□□ -0.02
FOXA2Q9Y261 AP005242.2-201ENST00000580065 1175 ntBASIC14.95□□□□□ -0.02
FOXA2Q9Y261 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC14.95□□□□□ -0.02
FOXA2Q9Y261 AP000525.1-201ENST00000608286 694 ntBASIC14.95□□□□□ -0.02
FOXA2Q9Y261 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
FOXA2Q9Y261 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
FOXA2Q9Y261 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
FOXA2Q9Y261 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
FOXA2Q9Y261 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC14.95□□□□□ -0.02
FOXA2Q9Y261 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
FOXA2Q9Y261 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC14.95□□□□□ -0.02
FOXA2Q9Y261 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC14.95□□□□□ -0.02
FOXA2Q9Y261 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
FOXA2Q9Y261 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC14.95□□□□□ -0.02
FOXA2Q9Y261 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
FOXA2Q9Y261 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
FOXA2Q9Y261 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms