Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HHLA3Q9XRX5 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
HHLA3Q9XRX5 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HHLA3Q9XRX5 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
HHLA3Q9XRX5 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HHLA3Q9XRX5 ABHD17AP1-201ENST00000358206 933 ntBASIC13.54□□□□□ -0.24
HHLA3Q9XRX5 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HHLA3Q9XRX5 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC13.54□□□□□ -0.24
HHLA3Q9XRX5 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
HHLA3Q9XRX5 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
HHLA3Q9XRX5 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
HHLA3Q9XRX5 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC13.54□□□□□ -0.24
HHLA3Q9XRX5 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC13.54□□□□□ -0.24
HHLA3Q9XRX5 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC13.54□□□□□ -0.24
HHLA3Q9XRX5 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
HHLA3Q9XRX5 AL445675.2-201ENST00000620291 557 ntBASIC13.54□□□□□ -0.24
HHLA3Q9XRX5 TMEM191A-211ENST00000637163 1067 ntBASIC13.54□□□□□ -0.24
HHLA3Q9XRX5 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HHLA3Q9XRX5 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC13.54□□□□□ -0.24
HHLA3Q9XRX5 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
HHLA3Q9XRX5 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
HHLA3Q9XRX5 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
HHLA3Q9XRX5 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HHLA3Q9XRX5 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC13.54□□□□□ -0.24
HHLA3Q9XRX5 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
HHLA3Q9XRX5 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
HHLA3Q9XRX5 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC13.54□□□□□ -0.24
HHLA3Q9XRX5 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC13.54□□□□□ -0.24
HHLA3Q9XRX5 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
HHLA3Q9XRX5 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
HHLA3Q9XRX5 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
HHLA3Q9XRX5 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HHLA3Q9XRX5 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC13.54□□□□□ -0.24
HHLA3Q9XRX5 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
HHLA3Q9XRX5 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC13.53□□□□□ -0.24
HHLA3Q9XRX5 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
HHLA3Q9XRX5 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC13.53□□□□□ -0.24
HHLA3Q9XRX5 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
HHLA3Q9XRX5 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HHLA3Q9XRX5 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HHLA3Q9XRX5 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC13.53□□□□□ -0.24
HHLA3Q9XRX5 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
HHLA3Q9XRX5 HR-201ENST00000312841 5351 ntTSL 5 BASIC13.53□□□□□ -0.24
HHLA3Q9XRX5 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HHLA3Q9XRX5 PEX7-202ENST00000367756 680 ntTSL 3 BASIC13.53□□□□□ -0.24
HHLA3Q9XRX5 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
HHLA3Q9XRX5 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HHLA3Q9XRX5 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
HHLA3Q9XRX5 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC13.53□□□□□ -0.24
HHLA3Q9XRX5 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
HHLA3Q9XRX5 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
HHLA3Q9XRX5 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC13.53□□□□□ -0.24
HHLA3Q9XRX5 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC13.53□□□□□ -0.24
HHLA3Q9XRX5 AF186192.3-201ENST00000583427 947 ntBASIC13.53□□□□□ -0.24
HHLA3Q9XRX5 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HHLA3Q9XRX5 AC073195.1-201ENST00000607241 877 ntBASIC13.53□□□□□ -0.24
HHLA3Q9XRX5 AP001412.1-201ENST00000608405 714 ntBASIC13.53□□□□□ -0.24
HHLA3Q9XRX5 CR392000.1-201ENST00000624770 1228 ntBASIC13.53□□□□□ -0.24
HHLA3Q9XRX5 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC13.53□□□□□ -0.24
HHLA3Q9XRX5 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
HHLA3Q9XRX5 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
HHLA3Q9XRX5 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
HHLA3Q9XRX5 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
HHLA3Q9XRX5 KRT16P1-201ENST00000399124 1418 ntBASIC13.53□□□□□ -0.24
HHLA3Q9XRX5 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
HHLA3Q9XRX5 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
HHLA3Q9XRX5 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HHLA3Q9XRX5 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HHLA3Q9XRX5 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
HHLA3Q9XRX5 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HHLA3Q9XRX5 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC13.53□□□□□ -0.24
HHLA3Q9XRX5 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC13.53□□□□□ -0.24
HHLA3Q9XRX5 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HHLA3Q9XRX5 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
HHLA3Q9XRX5 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
HHLA3Q9XRX5 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
HHLA3Q9XRX5 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
HHLA3Q9XRX5 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC13.52□□□□□ -0.24
HHLA3Q9XRX5 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
HHLA3Q9XRX5 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
HHLA3Q9XRX5 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
HHLA3Q9XRX5 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
HHLA3Q9XRX5 AL139384.1-201ENST00000612143 3047 ntBASIC13.52□□□□□ -0.24
HHLA3Q9XRX5 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
HHLA3Q9XRX5 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
HHLA3Q9XRX5 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
HHLA3Q9XRX5 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
HHLA3Q9XRX5 GCSHP5-201ENST00000443090 522 ntBASIC13.52□□□□□ -0.25
HHLA3Q9XRX5 FDX2-207ENST00000494368 584 ntTSL 4 BASIC13.52□□□□□ -0.25
HHLA3Q9XRX5 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC13.52□□□□□ -0.25
HHLA3Q9XRX5 RPS15-203ENST00000586096 570 ntTSL 2 BASIC13.52□□□□□ -0.25
HHLA3Q9XRX5 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC13.52□□□□□ -0.25
HHLA3Q9XRX5 AL031985.4-201ENST00000642138 673 ntBASIC13.52□□□□□ -0.25
HHLA3Q9XRX5 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
HHLA3Q9XRX5 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
HHLA3Q9XRX5 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC13.52□□□□□ -0.25
HHLA3Q9XRX5 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
HHLA3Q9XRX5 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
HHLA3Q9XRX5 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC13.52□□□□□ -0.25
HHLA3Q9XRX5 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms