Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
ZC3H4Q9UPT8 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC22.31■■□□□ 1.16
ZC3H4Q9UPT8 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
ZC3H4Q9UPT8 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
ZC3H4Q9UPT8 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
ZC3H4Q9UPT8 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
ZC3H4Q9UPT8 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
ZC3H4Q9UPT8 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC22.31■■□□□ 1.16
ZC3H4Q9UPT8 RBSN-204ENST00000449050 903 ntTSL 2 BASIC22.31■■□□□ 1.16
ZC3H4Q9UPT8 AC239800.4-201ENST00000603712 296 ntBASIC22.31■■□□□ 1.16
ZC3H4Q9UPT8 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
ZC3H4Q9UPT8 AL391422.3-201ENST00000603791 2761 ntBASIC22.31■■□□□ 1.16
ZC3H4Q9UPT8 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
ZC3H4Q9UPT8 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC22.3■■□□□ 1.16
ZC3H4Q9UPT8 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
ZC3H4Q9UPT8 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
ZC3H4Q9UPT8 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
ZC3H4Q9UPT8 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC22.3■■□□□ 1.16
ZC3H4Q9UPT8 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
ZC3H4Q9UPT8 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC22.3■■□□□ 1.16
ZC3H4Q9UPT8 INTS4P1-201ENST00000438455 1935 ntBASIC22.3■■□□□ 1.16
ZC3H4Q9UPT8 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
ZC3H4Q9UPT8 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
ZC3H4Q9UPT8 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC22.3■■□□□ 1.16
ZC3H4Q9UPT8 BEX3-201ENST00000361298 921 ntTSL 2 BASIC22.3■■□□□ 1.16
ZC3H4Q9UPT8 INIP-202ENST00000374236 874 ntTSL 2 BASIC22.3■■□□□ 1.16
ZC3H4Q9UPT8 PON3-203ENST00000427422 894 ntTSL 3 BASIC22.3■■□□□ 1.16
ZC3H4Q9UPT8 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC22.3■■□□□ 1.16
ZC3H4Q9UPT8 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC22.3■■□□□ 1.16
ZC3H4Q9UPT8 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
ZC3H4Q9UPT8 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC22.3■■□□□ 1.16
ZC3H4Q9UPT8 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC22.3■■□□□ 1.16
ZC3H4Q9UPT8 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC22.3■■□□□ 1.16
ZC3H4Q9UPT8 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC22.29■■□□□ 1.16
ZC3H4Q9UPT8 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC22.29■■□□□ 1.16
ZC3H4Q9UPT8 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
ZC3H4Q9UPT8 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
ZC3H4Q9UPT8 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
ZC3H4Q9UPT8 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
ZC3H4Q9UPT8 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC22.29■■□□□ 1.16
ZC3H4Q9UPT8 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
ZC3H4Q9UPT8 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
ZC3H4Q9UPT8 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
ZC3H4Q9UPT8 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
ZC3H4Q9UPT8 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC22.29■■□□□ 1.16
ZC3H4Q9UPT8 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
ZC3H4Q9UPT8 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
ZC3H4Q9UPT8 CRCP-205ENST00000431089 942 ntTSL 2 BASIC22.29■■□□□ 1.16
ZC3H4Q9UPT8 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
ZC3H4Q9UPT8 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
ZC3H4Q9UPT8 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
ZC3H4Q9UPT8 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC22.29■■□□□ 1.16
ZC3H4Q9UPT8 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC22.29■■□□□ 1.16
ZC3H4Q9UPT8 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC22.29■■□□□ 1.16
ZC3H4Q9UPT8 AC025062.2-201ENST00000605477 670 ntBASIC22.29■■□□□ 1.16
ZC3H4Q9UPT8 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC22.29■■□□□ 1.16
ZC3H4Q9UPT8 AL139288.1-201ENST00000623748 933 ntBASIC22.29■■□□□ 1.16
ZC3H4Q9UPT8 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC22.28■■□□□ 1.16
ZC3H4Q9UPT8 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
ZC3H4Q9UPT8 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC22.28■■□□□ 1.16
ZC3H4Q9UPT8 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
ZC3H4Q9UPT8 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC22.28■■□□□ 1.16
ZC3H4Q9UPT8 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
ZC3H4Q9UPT8 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
ZC3H4Q9UPT8 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC22.28■■□□□ 1.16
ZC3H4Q9UPT8 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
ZC3H4Q9UPT8 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
ZC3H4Q9UPT8 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
ZC3H4Q9UPT8 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
ZC3H4Q9UPT8 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
ZC3H4Q9UPT8 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC22.28■■□□□ 1.16
ZC3H4Q9UPT8 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
ZC3H4Q9UPT8 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
ZC3H4Q9UPT8 YBX1P5-201ENST00000509441 847 ntBASIC22.28■■□□□ 1.16
ZC3H4Q9UPT8 UNC93B6-202ENST00000528242 690 ntBASIC22.28■■□□□ 1.16
ZC3H4Q9UPT8 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC22.28■■□□□ 1.16
ZC3H4Q9UPT8 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC22.28■■□□□ 1.16
ZC3H4Q9UPT8 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC22.27■■□□□ 1.16
ZC3H4Q9UPT8 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
ZC3H4Q9UPT8 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
ZC3H4Q9UPT8 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC22.27■■□□□ 1.16
ZC3H4Q9UPT8 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
ZC3H4Q9UPT8 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
ZC3H4Q9UPT8 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC22.27■■□□□ 1.16
ZC3H4Q9UPT8 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC22.27■■□□□ 1.16
ZC3H4Q9UPT8 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
ZC3H4Q9UPT8 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC22.27■■□□□ 1.16
ZC3H4Q9UPT8 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
ZC3H4Q9UPT8 AL035633.1-201ENST00000406139 838 ntBASIC22.27■■□□□ 1.16
ZC3H4Q9UPT8 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC22.27■■□□□ 1.16
ZC3H4Q9UPT8 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
ZC3H4Q9UPT8 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
ZC3H4Q9UPT8 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC22.27■■□□□ 1.16
ZC3H4Q9UPT8 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC22.27■■□□□ 1.16
ZC3H4Q9UPT8 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC22.27■■□□□ 1.16
ZC3H4Q9UPT8 AC105339.3-201ENST00000560043 636 ntBASIC22.27■■□□□ 1.16
ZC3H4Q9UPT8 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC22.27■■□□□ 1.16
ZC3H4Q9UPT8 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC22.27■■□□□ 1.16
ZC3H4Q9UPT8 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC22.27■■□□□ 1.16
ZC3H4Q9UPT8 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms