Protein–RNA interactions for Protein: Q9UH73

EBF1, Transcription factor COE1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1Q9UH73 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
EBF1Q9UH73 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
EBF1Q9UH73 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC18.8■□□□□ 0.6
EBF1Q9UH73 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.8■□□□□ 0.6
EBF1Q9UH73 LITAF-220ENST00000620789 692 ntTSL 5 BASIC18.8■□□□□ 0.6
EBF1Q9UH73 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
EBF1Q9UH73 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
EBF1Q9UH73 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
EBF1Q9UH73 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
EBF1Q9UH73 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
EBF1Q9UH73 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
EBF1Q9UH73 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
EBF1Q9UH73 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
EBF1Q9UH73 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.8■□□□□ 0.6
EBF1Q9UH73 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
EBF1Q9UH73 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.8■□□□□ 0.6
EBF1Q9UH73 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
EBF1Q9UH73 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC18.8■□□□□ 0.6
EBF1Q9UH73 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
EBF1Q9UH73 Z82202.1-201ENST00000623446 1880 ntBASIC18.8■□□□□ 0.6
EBF1Q9UH73 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
EBF1Q9UH73 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
EBF1Q9UH73 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
EBF1Q9UH73 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
EBF1Q9UH73 TEX21P-204ENST00000641479 1693 ntBASIC18.79■□□□□ 0.6
EBF1Q9UH73 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
EBF1Q9UH73 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
EBF1Q9UH73 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
EBF1Q9UH73 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.79■□□□□ 0.6
EBF1Q9UH73 AC007613.1-201ENST00000572811 2597 ntBASIC18.79■□□□□ 0.6
EBF1Q9UH73 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.79■□□□□ 0.6
EBF1Q9UH73 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
EBF1Q9UH73 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
EBF1Q9UH73 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
EBF1Q9UH73 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
EBF1Q9UH73 KRT18P31-201ENST00000506277 1292 ntBASIC18.79■□□□□ 0.6
EBF1Q9UH73 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
EBF1Q9UH73 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC18.79■□□□□ 0.6
EBF1Q9UH73 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC18.79■□□□□ 0.6
EBF1Q9UH73 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC18.79■□□□□ 0.6
EBF1Q9UH73 AC090616.6-201ENST00000582640 721 ntBASIC18.79■□□□□ 0.6
EBF1Q9UH73 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
EBF1Q9UH73 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC18.79■□□□□ 0.6
EBF1Q9UH73 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
EBF1Q9UH73 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
EBF1Q9UH73 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.79■□□□□ 0.6
EBF1Q9UH73 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
EBF1Q9UH73 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
EBF1Q9UH73 AL109659.2-201ENST00000606809 1674 ntBASIC18.79■□□□□ 0.6
EBF1Q9UH73 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.79■□□□□ 0.6
EBF1Q9UH73 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
EBF1Q9UH73 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
EBF1Q9UH73 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
EBF1Q9UH73 TREX1-205ENST00000625293 1783 ntBASIC18.78■□□□□ 0.6
EBF1Q9UH73 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
EBF1Q9UH73 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
EBF1Q9UH73 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
EBF1Q9UH73 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
EBF1Q9UH73 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
EBF1Q9UH73 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
EBF1Q9UH73 HOXB1-202ENST00000577092 1414 ntBASIC18.78■□□□□ 0.6
EBF1Q9UH73 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
EBF1Q9UH73 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
EBF1Q9UH73 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
EBF1Q9UH73 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
EBF1Q9UH73 TOB2P1-201ENST00000469761 992 ntBASIC18.78■□□□□ 0.6
EBF1Q9UH73 AC106795.1-205ENST00000512851 1056 ntBASIC18.78■□□□□ 0.6
EBF1Q9UH73 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
EBF1Q9UH73 AC104390.1-201ENST00000555663 520 ntBASIC18.78■□□□□ 0.6
EBF1Q9UH73 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
EBF1Q9UH73 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC18.78■□□□□ 0.6
EBF1Q9UH73 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
EBF1Q9UH73 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
EBF1Q9UH73 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC18.78■□□□□ 0.6
EBF1Q9UH73 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
EBF1Q9UH73 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
EBF1Q9UH73 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
EBF1Q9UH73 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
EBF1Q9UH73 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
EBF1Q9UH73 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
EBF1Q9UH73 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
EBF1Q9UH73 AC008556.1-201ENST00000610908 2040 ntBASIC18.78■□□□□ 0.6
EBF1Q9UH73 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
EBF1Q9UH73 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
EBF1Q9UH73 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
EBF1Q9UH73 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.77■□□□□ 0.6
EBF1Q9UH73 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
EBF1Q9UH73 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC18.77■□□□□ 0.6
EBF1Q9UH73 AL512353.2-201ENST00000448759 1962 ntBASIC18.77■□□□□ 0.6
EBF1Q9UH73 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
EBF1Q9UH73 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
EBF1Q9UH73 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
EBF1Q9UH73 AC005332.8-201ENST00000622750 2735 ntBASIC18.77■□□□□ 0.6
EBF1Q9UH73 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
EBF1Q9UH73 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
EBF1Q9UH73 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
EBF1Q9UH73 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
EBF1Q9UH73 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
EBF1Q9UH73 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC18.77■□□□□ 0.6
EBF1Q9UH73 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms