Protein–RNA interactions for Protein: Q9P035

HACD3, Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3Q9P035 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC18.69■□□□□ 0.58
HACD3Q9P035 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC18.69■□□□□ 0.58
HACD3Q9P035 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
HACD3Q9P035 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC18.69■□□□□ 0.58
HACD3Q9P035 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC18.69■□□□□ 0.58
HACD3Q9P035 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HACD3Q9P035 AC097493.4-201ENST00000641197 219 ntBASIC18.69■□□□□ 0.58
HACD3Q9P035 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HACD3Q9P035 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
HACD3Q9P035 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HACD3Q9P035 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HACD3Q9P035 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HACD3Q9P035 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HACD3Q9P035 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC18.69■□□□□ 0.58
HACD3Q9P035 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HACD3Q9P035 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HACD3Q9P035 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HACD3Q9P035 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
HACD3Q9P035 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
HACD3Q9P035 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
HACD3Q9P035 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
HACD3Q9P035 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HACD3Q9P035 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
HACD3Q9P035 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
HACD3Q9P035 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.68■□□□□ 0.58
HACD3Q9P035 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.68■□□□□ 0.58
HACD3Q9P035 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HACD3Q9P035 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.68■□□□□ 0.58
HACD3Q9P035 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC18.68■□□□□ 0.58
HACD3Q9P035 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC18.68■□□□□ 0.58
HACD3Q9P035 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HACD3Q9P035 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
HACD3Q9P035 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.68■□□□□ 0.58
HACD3Q9P035 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HACD3Q9P035 AC135050.7-201ENST00000624508 2218 ntBASIC18.68■□□□□ 0.58
HACD3Q9P035 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HACD3Q9P035 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC18.68■□□□□ 0.58
HACD3Q9P035 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.68■□□□□ 0.58
HACD3Q9P035 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC18.68■□□□□ 0.58
HACD3Q9P035 AC012306.2-201ENST00000609350 630 ntBASIC18.68■□□□□ 0.58
HACD3Q9P035 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HACD3Q9P035 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
HACD3Q9P035 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HACD3Q9P035 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HACD3Q9P035 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
HACD3Q9P035 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HACD3Q9P035 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HACD3Q9P035 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HACD3Q9P035 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HACD3Q9P035 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
HACD3Q9P035 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HACD3Q9P035 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
HACD3Q9P035 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HACD3Q9P035 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HACD3Q9P035 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC18.67■□□□□ 0.58
HACD3Q9P035 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC18.67■□□□□ 0.58
HACD3Q9P035 DUT-205ENST00000558813 769 ntTSL 2 BASIC18.67■□□□□ 0.58
HACD3Q9P035 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC18.67■□□□□ 0.58
HACD3Q9P035 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC18.67■□□□□ 0.58
HACD3Q9P035 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HACD3Q9P035 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HACD3Q9P035 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.67■□□□□ 0.58
HACD3Q9P035 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
HACD3Q9P035 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HACD3Q9P035 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
HACD3Q9P035 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HACD3Q9P035 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HACD3Q9P035 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
HACD3Q9P035 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HACD3Q9P035 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HACD3Q9P035 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
HACD3Q9P035 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
HACD3Q9P035 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC18.66■□□□□ 0.58
HACD3Q9P035 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HACD3Q9P035 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HACD3Q9P035 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
HACD3Q9P035 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HACD3Q9P035 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HACD3Q9P035 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HACD3Q9P035 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
HACD3Q9P035 AC020916.1-201ENST00000587762 1774 ntBASIC18.66■□□□□ 0.58
HACD3Q9P035 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HACD3Q9P035 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HACD3Q9P035 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HACD3Q9P035 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
HACD3Q9P035 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
HACD3Q9P035 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HACD3Q9P035 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC18.66■□□□□ 0.58
HACD3Q9P035 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HACD3Q9P035 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
HACD3Q9P035 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
HACD3Q9P035 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
HACD3Q9P035 SLC25A3P1-201ENST00000443844 931 ntBASIC18.66■□□□□ 0.58
HACD3Q9P035 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
HACD3Q9P035 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HACD3Q9P035 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HACD3Q9P035 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
HACD3Q9P035 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC18.66■□□□□ 0.58
HACD3Q9P035 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HACD3Q9P035 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms