Protein–RNA interactions for Protein: Q9NWY4

HPF1, Histone PARylation factor 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPF1Q9NWY4 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HPF1Q9NWY4 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
HPF1Q9NWY4 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HPF1Q9NWY4 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
HPF1Q9NWY4 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC17.14■□□□□ 0.33
HPF1Q9NWY4 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17.14■□□□□ 0.33
HPF1Q9NWY4 CD320-202ENST00000537716 1119 ntTSL 2 BASIC17.14■□□□□ 0.33
HPF1Q9NWY4 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HPF1Q9NWY4 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC17.14■□□□□ 0.33
HPF1Q9NWY4 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HPF1Q9NWY4 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
HPF1Q9NWY4 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HPF1Q9NWY4 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HPF1Q9NWY4 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HPF1Q9NWY4 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC17.14■□□□□ 0.33
HPF1Q9NWY4 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC17.14■□□□□ 0.33
HPF1Q9NWY4 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
HPF1Q9NWY4 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
HPF1Q9NWY4 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HPF1Q9NWY4 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC17.14■□□□□ 0.33
HPF1Q9NWY4 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HPF1Q9NWY4 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC17.14■□□□□ 0.33
HPF1Q9NWY4 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC17.14■□□□□ 0.33
HPF1Q9NWY4 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
HPF1Q9NWY4 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HPF1Q9NWY4 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.14■□□□□ 0.33
HPF1Q9NWY4 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.14■□□□□ 0.33
HPF1Q9NWY4 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HPF1Q9NWY4 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HPF1Q9NWY4 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HPF1Q9NWY4 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
HPF1Q9NWY4 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HPF1Q9NWY4 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
HPF1Q9NWY4 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
HPF1Q9NWY4 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
HPF1Q9NWY4 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC17.13■□□□□ 0.33
HPF1Q9NWY4 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HPF1Q9NWY4 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17.13■□□□□ 0.33
HPF1Q9NWY4 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
HPF1Q9NWY4 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HPF1Q9NWY4 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HPF1Q9NWY4 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HPF1Q9NWY4 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
HPF1Q9NWY4 SPDYE15P-201ENST00000424157 909 ntBASIC17.13■□□□□ 0.33
HPF1Q9NWY4 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17.13■□□□□ 0.33
HPF1Q9NWY4 RASA4DP-201ENST00000460726 1199 ntBASIC17.13■□□□□ 0.33
HPF1Q9NWY4 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC17.13■□□□□ 0.33
HPF1Q9NWY4 DBP-204ENST00000599385 709 ntTSL 3 BASIC17.13■□□□□ 0.33
HPF1Q9NWY4 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC17.13■□□□□ 0.33
HPF1Q9NWY4 AL121956.5-201ENST00000625261 221 ntBASIC17.13■□□□□ 0.33
HPF1Q9NWY4 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
HPF1Q9NWY4 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC17.13■□□□□ 0.33
HPF1Q9NWY4 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
HPF1Q9NWY4 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC17.13■□□□□ 0.33
HPF1Q9NWY4 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
HPF1Q9NWY4 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HPF1Q9NWY4 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
HPF1Q9NWY4 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HPF1Q9NWY4 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HPF1Q9NWY4 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HPF1Q9NWY4 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HPF1Q9NWY4 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC17.12■□□□□ 0.33
HPF1Q9NWY4 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HPF1Q9NWY4 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
HPF1Q9NWY4 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
HPF1Q9NWY4 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HPF1Q9NWY4 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.12■□□□□ 0.33
HPF1Q9NWY4 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HPF1Q9NWY4 DAP-202ENST00000432074 1048 ntTSL 2 BASIC17.12■□□□□ 0.33
HPF1Q9NWY4 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC17.12■□□□□ 0.33
HPF1Q9NWY4 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC17.12■□□□□ 0.33
HPF1Q9NWY4 SEC1P-202ENST00000473944 940 ntBASIC17.12■□□□□ 0.33
HPF1Q9NWY4 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC17.12■□□□□ 0.33
HPF1Q9NWY4 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC17.12■□□□□ 0.33
HPF1Q9NWY4 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
HPF1Q9NWY4 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC17.12■□□□□ 0.33
HPF1Q9NWY4 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
HPF1Q9NWY4 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
HPF1Q9NWY4 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC17.12■□□□□ 0.33
HPF1Q9NWY4 FGF14-AS2-201ENST00000606448 1074 ntBASIC17.12■□□□□ 0.33
HPF1Q9NWY4 AC091076.1-201ENST00000610741 619 ntBASIC17.12■□□□□ 0.33
HPF1Q9NWY4 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
HPF1Q9NWY4 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC17.12■□□□□ 0.33
HPF1Q9NWY4 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC17.12■□□□□ 0.33
HPF1Q9NWY4 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HPF1Q9NWY4 HEIH-201ENST00000623091 1652 ntBASIC17.12■□□□□ 0.33
HPF1Q9NWY4 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.12■□□□□ 0.33
HPF1Q9NWY4 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
HPF1Q9NWY4 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
HPF1Q9NWY4 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HPF1Q9NWY4 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HPF1Q9NWY4 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HPF1Q9NWY4 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC17.12■□□□□ 0.33
HPF1Q9NWY4 LINC01311-201ENST00000565162 1445 ntBASIC17.12■□□□□ 0.33
HPF1Q9NWY4 HOXB1-202ENST00000577092 1414 ntBASIC17.12■□□□□ 0.33
HPF1Q9NWY4 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HPF1Q9NWY4 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HPF1Q9NWY4 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
HPF1Q9NWY4 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HPF1Q9NWY4 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms