Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CD248Q9HCU0 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
CD248Q9HCU0 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CD248Q9HCU0 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CD248Q9HCU0 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
CD248Q9HCU0 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CD248Q9HCU0 AC138932.1-201ENST00000534164 6830 ntBASIC19.39■□□□□ 0.69
CD248Q9HCU0 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC19.39■□□□□ 0.69
CD248Q9HCU0 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CD248Q9HCU0 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CD248Q9HCU0 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CD248Q9HCU0 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CD248Q9HCU0 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CD248Q9HCU0 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
CD248Q9HCU0 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CD248Q9HCU0 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CD248Q9HCU0 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CD248Q9HCU0 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
CD248Q9HCU0 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CD248Q9HCU0 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CD248Q9HCU0 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC19.38■□□□□ 0.69
CD248Q9HCU0 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
CD248Q9HCU0 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
CD248Q9HCU0 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC19.38■□□□□ 0.69
CD248Q9HCU0 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.38■□□□□ 0.69
CD248Q9HCU0 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC19.38■□□□□ 0.69
CD248Q9HCU0 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC19.38■□□□□ 0.69
CD248Q9HCU0 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CD248Q9HCU0 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
CD248Q9HCU0 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC19.38■□□□□ 0.69
CD248Q9HCU0 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CD248Q9HCU0 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC19.38■□□□□ 0.69
CD248Q9HCU0 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC19.38■□□□□ 0.69
CD248Q9HCU0 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CD248Q9HCU0 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
CD248Q9HCU0 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CD248Q9HCU0 AL441883.1-201ENST00000566170 1045 ntBASIC19.38■□□□□ 0.69
CD248Q9HCU0 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CD248Q9HCU0 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CD248Q9HCU0 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CD248Q9HCU0 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
CD248Q9HCU0 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
CD248Q9HCU0 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
CD248Q9HCU0 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CD248Q9HCU0 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CD248Q9HCU0 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.37■□□□□ 0.69
CD248Q9HCU0 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.37■□□□□ 0.69
CD248Q9HCU0 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.37■□□□□ 0.69
CD248Q9HCU0 ANKRD18DP-204ENST00000455355 1975 ntBASIC19.37■□□□□ 0.69
CD248Q9HCU0 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC19.37■□□□□ 0.69
CD248Q9HCU0 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
CD248Q9HCU0 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC19.37■□□□□ 0.69
CD248Q9HCU0 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CD248Q9HCU0 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CD248Q9HCU0 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC19.37■□□□□ 0.69
CD248Q9HCU0 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC19.37■□□□□ 0.69
CD248Q9HCU0 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CD248Q9HCU0 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC19.37■□□□□ 0.69
CD248Q9HCU0 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CD248Q9HCU0 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC19.37■□□□□ 0.69
CD248Q9HCU0 EML3-216ENST00000529309 2909 ntTSL 2 BASIC19.37■□□□□ 0.69
CD248Q9HCU0 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CD248Q9HCU0 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CD248Q9HCU0 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
CD248Q9HCU0 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CD248Q9HCU0 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CD248Q9HCU0 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CD248Q9HCU0 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CD248Q9HCU0 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC19.37■□□□□ 0.69
CD248Q9HCU0 BET1L-202ENST00000332865 533 ntTSL 5 BASIC19.37■□□□□ 0.69
CD248Q9HCU0 AL512604.3-201ENST00000569583 964 ntBASIC19.37■□□□□ 0.69
CD248Q9HCU0 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC19.37■□□□□ 0.69
CD248Q9HCU0 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC19.37■□□□□ 0.69
CD248Q9HCU0 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC19.37■□□□□ 0.69
CD248Q9HCU0 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC19.37■□□□□ 0.69
CD248Q9HCU0 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC19.37■□□□□ 0.69
CD248Q9HCU0 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC19.37■□□□□ 0.69
CD248Q9HCU0 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
CD248Q9HCU0 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC19.37■□□□□ 0.69
CD248Q9HCU0 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CD248Q9HCU0 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CD248Q9HCU0 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CD248Q9HCU0 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CD248Q9HCU0 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC19.37■□□□□ 0.69
CD248Q9HCU0 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC19.37■□□□□ 0.69
CD248Q9HCU0 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CD248Q9HCU0 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CD248Q9HCU0 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CD248Q9HCU0 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CD248Q9HCU0 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC19.37■□□□□ 0.69
CD248Q9HCU0 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CD248Q9HCU0 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CD248Q9HCU0 MED25-212ENST00000618715 1467 ntTSL 5 BASIC19.36■□□□□ 0.69
CD248Q9HCU0 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CD248Q9HCU0 KRT8P45-201ENST00000414328 1447 ntBASIC19.36■□□□□ 0.69
CD248Q9HCU0 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC19.36■□□□□ 0.69
CD248Q9HCU0 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
CD248Q9HCU0 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC19.36■□□□□ 0.69
CD248Q9HCU0 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
CD248Q9HCU0 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms