Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC16.17■□□□□ 0.18
CDH20Q9HBT6 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC16.17■□□□□ 0.18
CDH20Q9HBT6 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CDH20Q9HBT6 AC010203.1-204ENST00000548782 407 ntBASIC16.17■□□□□ 0.18
CDH20Q9HBT6 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC16.17■□□□□ 0.18
CDH20Q9HBT6 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
CDH20Q9HBT6 P4HB-223ENST00000576390 439 ntTSL 4 BASIC16.17■□□□□ 0.18
CDH20Q9HBT6 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
CDH20Q9HBT6 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CDH20Q9HBT6 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDH20Q9HBT6 COBL-210ENST00000632460 1941 ntTSL 5 BASIC16.17■□□□□ 0.18
CDH20Q9HBT6 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC16.17■□□□□ 0.18
CDH20Q9HBT6 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
CDH20Q9HBT6 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
CDH20Q9HBT6 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
CDH20Q9HBT6 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
CDH20Q9HBT6 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
CDH20Q9HBT6 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC16.16■□□□□ 0.18
CDH20Q9HBT6 LGALS8-AS1-201ENST00000487567 1457 ntBASIC16.16■□□□□ 0.18
CDH20Q9HBT6 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC16.16■□□□□ 0.18
CDH20Q9HBT6 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDH20Q9HBT6 Z98044.1-201ENST00000632503 1764 ntBASIC16.16■□□□□ 0.18
CDH20Q9HBT6 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC16.16■□□□□ 0.18
CDH20Q9HBT6 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC16.16■□□□□ 0.18
CDH20Q9HBT6 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
CDH20Q9HBT6 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC16.16■□□□□ 0.18
CDH20Q9HBT6 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDH20Q9HBT6 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC16.16■□□□□ 0.18
CDH20Q9HBT6 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDH20Q9HBT6 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDH20Q9HBT6 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDH20Q9HBT6 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDH20Q9HBT6 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CDH20Q9HBT6 ILF2-202ENST00000368681 726 ntTSL 2 BASIC16.16■□□□□ 0.18
CDH20Q9HBT6 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDH20Q9HBT6 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDH20Q9HBT6 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDH20Q9HBT6 KRT18P57-201ENST00000443599 1254 ntBASIC16.16■□□□□ 0.18
CDH20Q9HBT6 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDH20Q9HBT6 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDH20Q9HBT6 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDH20Q9HBT6 AC141257.4-201ENST00000634557 245 ntBASIC16.16■□□□□ 0.18
CDH20Q9HBT6 AC136944.6-201ENST00000634818 245 ntBASIC16.16■□□□□ 0.18
CDH20Q9HBT6 MYC-208ENST00000641036 567 ntBASIC16.16■□□□□ 0.18
CDH20Q9HBT6 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CDH20Q9HBT6 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDH20Q9HBT6 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDH20Q9HBT6 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDH20Q9HBT6 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CDH20Q9HBT6 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDH20Q9HBT6 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDH20Q9HBT6 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDH20Q9HBT6 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDH20Q9HBT6 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDH20Q9HBT6 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
CDH20Q9HBT6 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC16.15■□□□□ 0.18
CDH20Q9HBT6 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC16.15■□□□□ 0.18
CDH20Q9HBT6 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDH20Q9HBT6 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDH20Q9HBT6 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CDH20Q9HBT6 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC16.15■□□□□ 0.18
CDH20Q9HBT6 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDH20Q9HBT6 Telomerase-vert.1-201ENST00000363312 438 ntBASIC16.15■□□□□ 0.18
CDH20Q9HBT6 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
CDH20Q9HBT6 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC16.15■□□□□ 0.18
CDH20Q9HBT6 GRAMD4P1-201ENST00000435181 1110 ntBASIC16.15■□□□□ 0.18
CDH20Q9HBT6 KRT18P23-201ENST00000435622 1283 ntBASIC16.15■□□□□ 0.18
CDH20Q9HBT6 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
CDH20Q9HBT6 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC16.15■□□□□ 0.18
CDH20Q9HBT6 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
CDH20Q9HBT6 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC16.15■□□□□ 0.18
CDH20Q9HBT6 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC16.15■□□□□ 0.18
CDH20Q9HBT6 AC140113.3-201ENST00000605663 199 ntBASIC16.15■□□□□ 0.18
CDH20Q9HBT6 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC16.15■□□□□ 0.18
CDH20Q9HBT6 AC093525.10-201ENST00000625130 1569 ntBASIC16.15■□□□□ 0.18
CDH20Q9HBT6 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.15■□□□□ 0.18
CDH20Q9HBT6 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDH20Q9HBT6 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CDH20Q9HBT6 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDH20Q9HBT6 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDH20Q9HBT6 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDH20Q9HBT6 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDH20Q9HBT6 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDH20Q9HBT6 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDH20Q9HBT6 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDH20Q9HBT6 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDH20Q9HBT6 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDH20Q9HBT6 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDH20Q9HBT6 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDH20Q9HBT6 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC16.14■□□□□ 0.17
CDH20Q9HBT6 SNAI3-AS1-205ENST00000568633 2096 ntBASIC16.14■□□□□ 0.17
CDH20Q9HBT6 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CDH20Q9HBT6 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CDH20Q9HBT6 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC16.14■□□□□ 0.17
CDH20Q9HBT6 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDH20Q9HBT6 GAD2-202ENST00000376248 680 ntTSL 5 BASIC16.14■□□□□ 0.17
CDH20Q9HBT6 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC16.14■□□□□ 0.17
CDH20Q9HBT6 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CDH20Q9HBT6 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC16.14■□□□□ 0.17
CDH20Q9HBT6 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms