Protein–RNA interactions for Protein: Q9HBG4

ATP6V0A4, V-type proton ATPase 116 kDa subunit a isoform 4, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A4Q9HBG4 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC20.54■□□□□ 0.88
ATP6V0A4Q9HBG4 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC20.54■□□□□ 0.88
ATP6V0A4Q9HBG4 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ATP6V0A4Q9HBG4 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ATP6V0A4Q9HBG4 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC20.54■□□□□ 0.88
ATP6V0A4Q9HBG4 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
ATP6V0A4Q9HBG4 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ATP6V0A4Q9HBG4 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ATP6V0A4Q9HBG4 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ATP6V0A4Q9HBG4 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
ATP6V0A4Q9HBG4 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ATP6V0A4Q9HBG4 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ATP6V0A4Q9HBG4 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ATP6V0A4Q9HBG4 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ATP6V0A4Q9HBG4 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ATP6V0A4Q9HBG4 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ATP6V0A4Q9HBG4 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ATP6V0A4Q9HBG4 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC20.53■□□□□ 0.88
ATP6V0A4Q9HBG4 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC20.53■□□□□ 0.88
ATP6V0A4Q9HBG4 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC20.53■□□□□ 0.88
ATP6V0A4Q9HBG4 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ATP6V0A4Q9HBG4 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ATP6V0A4Q9HBG4 AC093525.10-201ENST00000625130 1569 ntBASIC20.53■□□□□ 0.88
ATP6V0A4Q9HBG4 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ATP6V0A4Q9HBG4 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
ATP6V0A4Q9HBG4 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ATP6V0A4Q9HBG4 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ATP6V0A4Q9HBG4 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ATP6V0A4Q9HBG4 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ATP6V0A4Q9HBG4 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ATP6V0A4Q9HBG4 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ATP6V0A4Q9HBG4 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC20.53■□□□□ 0.88
ATP6V0A4Q9HBG4 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ATP6V0A4Q9HBG4 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ATP6V0A4Q9HBG4 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
ATP6V0A4Q9HBG4 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ATP6V0A4Q9HBG4 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC20.52■□□□□ 0.88
ATP6V0A4Q9HBG4 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
ATP6V0A4Q9HBG4 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
ATP6V0A4Q9HBG4 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ATP6V0A4Q9HBG4 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC20.52■□□□□ 0.88
ATP6V0A4Q9HBG4 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
ATP6V0A4Q9HBG4 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
ATP6V0A4Q9HBG4 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ATP6V0A4Q9HBG4 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ATP6V0A4Q9HBG4 IPPK-202ENST00000375522 882 ntTSL 3 BASIC20.52■□□□□ 0.88
ATP6V0A4Q9HBG4 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
ATP6V0A4Q9HBG4 AC092597.1-201ENST00000487352 616 ntBASIC20.52■□□□□ 0.88
ATP6V0A4Q9HBG4 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC20.52■□□□□ 0.88
ATP6V0A4Q9HBG4 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC20.52■□□□□ 0.88
ATP6V0A4Q9HBG4 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC20.52■□□□□ 0.88
ATP6V0A4Q9HBG4 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
ATP6V0A4Q9HBG4 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC20.52■□□□□ 0.88
ATP6V0A4Q9HBG4 CLN6-214ENST00000636314 442 ntTSL 3 BASIC20.52■□□□□ 0.88
ATP6V0A4Q9HBG4 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ATP6V0A4Q9HBG4 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
ATP6V0A4Q9HBG4 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
ATP6V0A4Q9HBG4 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
ATP6V0A4Q9HBG4 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ATP6V0A4Q9HBG4 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
ATP6V0A4Q9HBG4 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.87
ATP6V0A4Q9HBG4 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
ATP6V0A4Q9HBG4 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
ATP6V0A4Q9HBG4 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
ATP6V0A4Q9HBG4 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ATP6V0A4Q9HBG4 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ATP6V0A4Q9HBG4 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
ATP6V0A4Q9HBG4 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ATP6V0A4Q9HBG4 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ATP6V0A4Q9HBG4 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
ATP6V0A4Q9HBG4 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ATP6V0A4Q9HBG4 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ATP6V0A4Q9HBG4 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ATP6V0A4Q9HBG4 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
ATP6V0A4Q9HBG4 HBZP1-201ENST00000354915 429 ntBASIC20.51■□□□□ 0.87
ATP6V0A4Q9HBG4 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ATP6V0A4Q9HBG4 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ATP6V0A4Q9HBG4 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
ATP6V0A4Q9HBG4 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
ATP6V0A4Q9HBG4 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC20.51■□□□□ 0.87
ATP6V0A4Q9HBG4 AC009065.1-201ENST00000564055 1225 ntBASIC20.51■□□□□ 0.87
ATP6V0A4Q9HBG4 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
ATP6V0A4Q9HBG4 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
ATP6V0A4Q9HBG4 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
ATP6V0A4Q9HBG4 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
ATP6V0A4Q9HBG4 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ATP6V0A4Q9HBG4 AC112777.1-201ENST00000540175 1423 ntBASIC20.51■□□□□ 0.87
ATP6V0A4Q9HBG4 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC20.51■□□□□ 0.87
ATP6V0A4Q9HBG4 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC20.51■□□□□ 0.87
ATP6V0A4Q9HBG4 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC20.51■□□□□ 0.87
ATP6V0A4Q9HBG4 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC20.5■□□□□ 0.87
ATP6V0A4Q9HBG4 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ATP6V0A4Q9HBG4 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ATP6V0A4Q9HBG4 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
ATP6V0A4Q9HBG4 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ATP6V0A4Q9HBG4 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC20.5■□□□□ 0.87
ATP6V0A4Q9HBG4 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
ATP6V0A4Q9HBG4 ANO7L1-203ENST00000602586 1720 ntBASIC20.5■□□□□ 0.87
ATP6V0A4Q9HBG4 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ATP6V0A4Q9HBG4 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms