Protein–RNA interactions for Protein: Q9H6T3

RPAP3, RNA polymerase II-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP3Q9H6T3 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RPAP3Q9H6T3 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RPAP3Q9H6T3 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RPAP3Q9H6T3 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
RPAP3Q9H6T3 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
RPAP3Q9H6T3 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RPAP3Q9H6T3 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RPAP3Q9H6T3 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
RPAP3Q9H6T3 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
RPAP3Q9H6T3 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RPAP3Q9H6T3 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RPAP3Q9H6T3 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
RPAP3Q9H6T3 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC21.23■□□□□ 0.99
RPAP3Q9H6T3 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RPAP3Q9H6T3 CALM3-211ENST00000598871 561 ntTSL 4 BASIC21.23■□□□□ 0.99
RPAP3Q9H6T3 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RPAP3Q9H6T3 AC009102.3-201ENST00000623118 1491 ntBASIC21.23■□□□□ 0.99
RPAP3Q9H6T3 SNAI3-AS1-205ENST00000568633 2096 ntBASIC21.23■□□□□ 0.99
RPAP3Q9H6T3 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RPAP3Q9H6T3 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RPAP3Q9H6T3 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RPAP3Q9H6T3 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RPAP3Q9H6T3 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC21.23■□□□□ 0.99
RPAP3Q9H6T3 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC21.23■□□□□ 0.99
RPAP3Q9H6T3 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RPAP3Q9H6T3 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC21.23■□□□□ 0.99
RPAP3Q9H6T3 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC21.23■□□□□ 0.99
RPAP3Q9H6T3 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RPAP3Q9H6T3 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RPAP3Q9H6T3 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RPAP3Q9H6T3 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RPAP3Q9H6T3 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RPAP3Q9H6T3 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RPAP3Q9H6T3 STX6-204ENST00000542060 4809 ntTSL 2 BASIC21.22■□□□□ 0.99
RPAP3Q9H6T3 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
RPAP3Q9H6T3 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC21.22■□□□□ 0.99
RPAP3Q9H6T3 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RPAP3Q9H6T3 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC21.22■□□□□ 0.99
RPAP3Q9H6T3 MRPL3P1-201ENST00000400109 1033 ntBASIC21.22■□□□□ 0.99
RPAP3Q9H6T3 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RPAP3Q9H6T3 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC21.22■□□□□ 0.99
RPAP3Q9H6T3 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC21.22■□□□□ 0.99
RPAP3Q9H6T3 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC21.22■□□□□ 0.99
RPAP3Q9H6T3 AC106795.1-205ENST00000512851 1056 ntBASIC21.22■□□□□ 0.99
RPAP3Q9H6T3 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC21.22■□□□□ 0.99
RPAP3Q9H6T3 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC21.22■□□□□ 0.99
RPAP3Q9H6T3 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC21.22■□□□□ 0.99
RPAP3Q9H6T3 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC21.22■□□□□ 0.99
RPAP3Q9H6T3 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RPAP3Q9H6T3 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RPAP3Q9H6T3 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC21.22■□□□□ 0.99
RPAP3Q9H6T3 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RPAP3Q9H6T3 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC21.22■□□□□ 0.99
RPAP3Q9H6T3 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RPAP3Q9H6T3 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RPAP3Q9H6T3 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC21.21■□□□□ 0.99
RPAP3Q9H6T3 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
RPAP3Q9H6T3 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RPAP3Q9H6T3 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RPAP3Q9H6T3 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RPAP3Q9H6T3 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RPAP3Q9H6T3 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
RPAP3Q9H6T3 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RPAP3Q9H6T3 LSM5-204ENST00000409909 740 ntTSL 2 BASIC21.21■□□□□ 0.99
RPAP3Q9H6T3 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC21.21■□□□□ 0.99
RPAP3Q9H6T3 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC21.21■□□□□ 0.99
RPAP3Q9H6T3 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RPAP3Q9H6T3 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
RPAP3Q9H6T3 IGHV3OR16-7-201ENST00000604106 360 ntBASIC21.21■□□□□ 0.99
RPAP3Q9H6T3 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
RPAP3Q9H6T3 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RPAP3Q9H6T3 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
RPAP3Q9H6T3 USP39-202ENST00000409025 1946 ntTSL 5 BASIC21.21■□□□□ 0.99
RPAP3Q9H6T3 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC21.21■□□□□ 0.99
RPAP3Q9H6T3 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC21.21■□□□□ 0.99
RPAP3Q9H6T3 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
RPAP3Q9H6T3 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
RPAP3Q9H6T3 AC005332.7-201ENST00000614046 2005 ntBASIC21.21■□□□□ 0.99
RPAP3Q9H6T3 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC21.21■□□□□ 0.99
RPAP3Q9H6T3 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
RPAP3Q9H6T3 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
RPAP3Q9H6T3 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
RPAP3Q9H6T3 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC21.2■□□□□ 0.98
RPAP3Q9H6T3 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC21.2■□□□□ 0.98
RPAP3Q9H6T3 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC21.2■□□□□ 0.98
RPAP3Q9H6T3 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC21.2■□□□□ 0.98
RPAP3Q9H6T3 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
RPAP3Q9H6T3 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RPAP3Q9H6T3 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RPAP3Q9H6T3 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RPAP3Q9H6T3 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RPAP3Q9H6T3 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC21.2■□□□□ 0.98
RPAP3Q9H6T3 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
RPAP3Q9H6T3 SAPCD2P3-201ENST00000455031 850 ntBASIC21.2■□□□□ 0.98
RPAP3Q9H6T3 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC21.2■□□□□ 0.98
RPAP3Q9H6T3 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RPAP3Q9H6T3 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC21.2■□□□□ 0.98
RPAP3Q9H6T3 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
RPAP3Q9H6T3 REXO1L6P-202ENST00000619970 1078 ntBASIC21.2■□□□□ 0.98
RPAP3Q9H6T3 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms