Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRIM2Q9C040 AC008556.1-201ENST00000610908 2040 ntBASIC17.03■□□□□ 0.32
TRIM2Q9C040 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
TRIM2Q9C040 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRIM2Q9C040 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRIM2Q9C040 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRIM2Q9C040 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRIM2Q9C040 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRIM2Q9C040 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
TRIM2Q9C040 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TRIM2Q9C040 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
TRIM2Q9C040 AL023284.2-201ENST00000405850 579 ntBASIC17.03■□□□□ 0.32
TRIM2Q9C040 MCCD1P1-208ENST00000445732 328 ntBASIC17.03■□□□□ 0.32
TRIM2Q9C040 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC17.03■□□□□ 0.32
TRIM2Q9C040 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC17.03■□□□□ 0.32
TRIM2Q9C040 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC17.03■□□□□ 0.32
TRIM2Q9C040 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC17.03■□□□□ 0.32
TRIM2Q9C040 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRIM2Q9C040 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRIM2Q9C040 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.03■□□□□ 0.32
TRIM2Q9C040 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
TRIM2Q9C040 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRIM2Q9C040 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRIM2Q9C040 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRIM2Q9C040 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.03■□□□□ 0.32
TRIM2Q9C040 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TRIM2Q9C040 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.03■□□□□ 0.32
TRIM2Q9C040 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRIM2Q9C040 AL354751.1-201ENST00000412768 1863 ntBASIC17.03■□□□□ 0.32
TRIM2Q9C040 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRIM2Q9C040 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.03■□□□□ 0.32
TRIM2Q9C040 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRIM2Q9C040 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRIM2Q9C040 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRIM2Q9C040 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRIM2Q9C040 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TRIM2Q9C040 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.03■□□□□ 0.32
TRIM2Q9C040 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.03■□□□□ 0.32
TRIM2Q9C040 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRIM2Q9C040 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.03■□□□□ 0.32
TRIM2Q9C040 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC17.02■□□□□ 0.32
TRIM2Q9C040 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
TRIM2Q9C040 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
TRIM2Q9C040 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
TRIM2Q9C040 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC17.02■□□□□ 0.32
TRIM2Q9C040 MCC-208ENST00000514701 2855 ntTSL 2 BASIC17.02■□□□□ 0.32
TRIM2Q9C040 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRIM2Q9C040 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC17.02■□□□□ 0.32
TRIM2Q9C040 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TRIM2Q9C040 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRIM2Q9C040 MIR564-202ENST00000385049 94 ntBASIC17.02■□□□□ 0.32
TRIM2Q9C040 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TRIM2Q9C040 CRYGFP-201ENST00000418459 633 ntBASIC17.02■□□□□ 0.32
TRIM2Q9C040 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
TRIM2Q9C040 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRIM2Q9C040 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
TRIM2Q9C040 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TRIM2Q9C040 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
TRIM2Q9C040 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.02■□□□□ 0.31
TRIM2Q9C040 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
TRIM2Q9C040 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
TRIM2Q9C040 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
TRIM2Q9C040 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TRIM2Q9C040 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRIM2Q9C040 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRIM2Q9C040 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRIM2Q9C040 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
TRIM2Q9C040 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TRIM2Q9C040 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
TRIM2Q9C040 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRIM2Q9C040 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TRIM2Q9C040 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRIM2Q9C040 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TRIM2Q9C040 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC17.01■□□□□ 0.31
TRIM2Q9C040 AP000593.1-201ENST00000393668 712 ntBASIC17.01■□□□□ 0.31
TRIM2Q9C040 AC087499.1-201ENST00000418141 1075 ntBASIC17.01■□□□□ 0.31
TRIM2Q9C040 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRIM2Q9C040 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC17.01■□□□□ 0.31
TRIM2Q9C040 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC17.01■□□□□ 0.31
TRIM2Q9C040 FDX2-206ENST00000492239 773 ntTSL 2 BASIC17.01■□□□□ 0.31
TRIM2Q9C040 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC17.01■□□□□ 0.31
TRIM2Q9C040 AP005242.2-201ENST00000580065 1175 ntBASIC17.01■□□□□ 0.31
TRIM2Q9C040 MYLKP1-201ENST00000509077 1580 ntBASIC17.01■□□□□ 0.31
TRIM2Q9C040 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
TRIM2Q9C040 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRIM2Q9C040 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
TRIM2Q9C040 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.01■□□□□ 0.31
TRIM2Q9C040 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRIM2Q9C040 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.01■□□□□ 0.31
TRIM2Q9C040 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC17.01■□□□□ 0.31
TRIM2Q9C040 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRIM2Q9C040 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TRIM2Q9C040 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC17.01■□□□□ 0.31
TRIM2Q9C040 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRIM2Q9C040 ABALON-201ENST00000629058 1903 ntBASIC17■□□□□ 0.31
TRIM2Q9C040 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
TRIM2Q9C040 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
TRIM2Q9C040 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
TRIM2Q9C040 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17■□□□□ 0.31
TRIM2Q9C040 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms