Protein–RNA interactions for Protein: Q9BQ75

CMSS1, Protein CMSS1, humanhuman

Known RBP Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1Q9BQ75 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CMSS1Q9BQ75 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CMSS1Q9BQ75 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CMSS1Q9BQ75 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
CMSS1Q9BQ75 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CMSS1Q9BQ75 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CMSS1Q9BQ75 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CMSS1Q9BQ75 UNC93B5-201ENST00000530315 699 ntBASIC15.81■□□□□ 0.12
CMSS1Q9BQ75 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC15.81■□□□□ 0.12
CMSS1Q9BQ75 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CMSS1Q9BQ75 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CMSS1Q9BQ75 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CMSS1Q9BQ75 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC15.81■□□□□ 0.12
CMSS1Q9BQ75 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CMSS1Q9BQ75 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC15.81■□□□□ 0.12
CMSS1Q9BQ75 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC15.81■□□□□ 0.12
CMSS1Q9BQ75 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CMSS1Q9BQ75 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CMSS1Q9BQ75 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC15.8■□□□□ 0.12
CMSS1Q9BQ75 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CMSS1Q9BQ75 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CMSS1Q9BQ75 NFYC-AS1-201ENST00000606277 1687 ntBASIC15.8■□□□□ 0.12
CMSS1Q9BQ75 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC15.8■□□□□ 0.12
CMSS1Q9BQ75 MTMR9LP-203ENST00000426597 1545 ntBASIC15.8■□□□□ 0.12
CMSS1Q9BQ75 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CMSS1Q9BQ75 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
CMSS1Q9BQ75 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CMSS1Q9BQ75 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CMSS1Q9BQ75 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CMSS1Q9BQ75 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CMSS1Q9BQ75 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CMSS1Q9BQ75 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC15.8■□□□□ 0.12
CMSS1Q9BQ75 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
CMSS1Q9BQ75 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC15.8■□□□□ 0.12
CMSS1Q9BQ75 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC15.8■□□□□ 0.12
CMSS1Q9BQ75 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC15.8■□□□□ 0.12
CMSS1Q9BQ75 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC15.8■□□□□ 0.12
CMSS1Q9BQ75 AC068587.9-201ENST00000641814 219 ntBASIC15.8■□□□□ 0.12
CMSS1Q9BQ75 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
CMSS1Q9BQ75 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CMSS1Q9BQ75 AL499627.1-201ENST00000569373 2188 ntBASIC15.8■□□□□ 0.12
CMSS1Q9BQ75 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC15.8■□□□□ 0.12
CMSS1Q9BQ75 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC15.8■□□□□ 0.12
CMSS1Q9BQ75 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CMSS1Q9BQ75 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC15.8■□□□□ 0.12
CMSS1Q9BQ75 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CMSS1Q9BQ75 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CMSS1Q9BQ75 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC15.8■□□□□ 0.12
CMSS1Q9BQ75 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC15.79■□□□□ 0.12
CMSS1Q9BQ75 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC15.79■□□□□ 0.12
CMSS1Q9BQ75 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
CMSS1Q9BQ75 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CMSS1Q9BQ75 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CMSS1Q9BQ75 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC15.79■□□□□ 0.12
CMSS1Q9BQ75 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC15.79■□□□□ 0.12
CMSS1Q9BQ75 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
CMSS1Q9BQ75 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC15.79■□□□□ 0.12
CMSS1Q9BQ75 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC15.79■□□□□ 0.12
CMSS1Q9BQ75 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CMSS1Q9BQ75 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
CMSS1Q9BQ75 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CMSS1Q9BQ75 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CMSS1Q9BQ75 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CMSS1Q9BQ75 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CMSS1Q9BQ75 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC15.79■□□□□ 0.12
CMSS1Q9BQ75 KRT17P3-201ENST00000420566 1262 ntBASIC15.79■□□□□ 0.12
CMSS1Q9BQ75 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC15.79■□□□□ 0.12
CMSS1Q9BQ75 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CMSS1Q9BQ75 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CMSS1Q9BQ75 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC15.79■□□□□ 0.12
CMSS1Q9BQ75 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CMSS1Q9BQ75 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CMSS1Q9BQ75 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC15.79■□□□□ 0.12
CMSS1Q9BQ75 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
CMSS1Q9BQ75 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
CMSS1Q9BQ75 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
CMSS1Q9BQ75 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CMSS1Q9BQ75 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CMSS1Q9BQ75 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
CMSS1Q9BQ75 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC15.78■□□□□ 0.12
CMSS1Q9BQ75 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
CMSS1Q9BQ75 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CMSS1Q9BQ75 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CMSS1Q9BQ75 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC15.78■□□□□ 0.12
CMSS1Q9BQ75 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CMSS1Q9BQ75 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC15.78■□□□□ 0.12
CMSS1Q9BQ75 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CMSS1Q9BQ75 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CMSS1Q9BQ75 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CMSS1Q9BQ75 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CMSS1Q9BQ75 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
CMSS1Q9BQ75 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC15.78■□□□□ 0.12
CMSS1Q9BQ75 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC15.78■□□□□ 0.12
CMSS1Q9BQ75 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CMSS1Q9BQ75 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC15.78■□□□□ 0.12
CMSS1Q9BQ75 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CMSS1Q9BQ75 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CMSS1Q9BQ75 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
CMSS1Q9BQ75 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.78■□□□□ 0.12
CMSS1Q9BQ75 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms