Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
VGLL1Q99990 AL357033.4-201ENST00000617703 1807 ntBASIC14.04□□□□□ -0.16
VGLL1Q99990 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
VGLL1Q99990 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VGLL1Q99990 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VGLL1Q99990 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC14.03□□□□□ -0.16
VGLL1Q99990 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
VGLL1Q99990 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
VGLL1Q99990 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC14.03□□□□□ -0.16
VGLL1Q99990 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VGLL1Q99990 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
VGLL1Q99990 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VGLL1Q99990 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VGLL1Q99990 AC239809.2-201ENST00000415381 517 ntBASIC14.03□□□□□ -0.16
VGLL1Q99990 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VGLL1Q99990 KRT16P5-201ENST00000455284 522 ntBASIC14.03□□□□□ -0.16
VGLL1Q99990 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
VGLL1Q99990 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
VGLL1Q99990 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC14.03□□□□□ -0.16
VGLL1Q99990 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC14.03□□□□□ -0.16
VGLL1Q99990 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
VGLL1Q99990 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC14.03□□□□□ -0.16
VGLL1Q99990 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VGLL1Q99990 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
VGLL1Q99990 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC14.03□□□□□ -0.16
VGLL1Q99990 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
VGLL1Q99990 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
VGLL1Q99990 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
VGLL1Q99990 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC14.03□□□□□ -0.16
VGLL1Q99990 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VGLL1Q99990 AC008764.6-201ENST00000595909 2069 ntBASIC14.03□□□□□ -0.16
VGLL1Q99990 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VGLL1Q99990 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VGLL1Q99990 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC14.03□□□□□ -0.16
VGLL1Q99990 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
VGLL1Q99990 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
VGLL1Q99990 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC14.03□□□□□ -0.16
VGLL1Q99990 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
VGLL1Q99990 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
VGLL1Q99990 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
VGLL1Q99990 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
VGLL1Q99990 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
VGLL1Q99990 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
VGLL1Q99990 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
VGLL1Q99990 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
VGLL1Q99990 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
VGLL1Q99990 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.16
VGLL1Q99990 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
VGLL1Q99990 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
VGLL1Q99990 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
VGLL1Q99990 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
VGLL1Q99990 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
VGLL1Q99990 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
VGLL1Q99990 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
VGLL1Q99990 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
VGLL1Q99990 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
VGLL1Q99990 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC14.02□□□□□ -0.16
VGLL1Q99990 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC14.02□□□□□ -0.16
VGLL1Q99990 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC14.02□□□□□ -0.16
VGLL1Q99990 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
VGLL1Q99990 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
VGLL1Q99990 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC14.02□□□□□ -0.16
VGLL1Q99990 KRT8P3-201ENST00000519669 1449 ntBASIC14.02□□□□□ -0.16
VGLL1Q99990 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
VGLL1Q99990 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC14.02□□□□□ -0.17
VGLL1Q99990 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
VGLL1Q99990 ID1-201ENST00000376105 1233 ntBASIC14.02□□□□□ -0.17
VGLL1Q99990 PTPA-216ENST00000432651 857 ntTSL 2 BASIC14.02□□□□□ -0.17
VGLL1Q99990 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC14.02□□□□□ -0.17
VGLL1Q99990 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC14.02□□□□□ -0.17
VGLL1Q99990 AC026366.1-201ENST00000488803 879 ntBASIC14.02□□□□□ -0.17
VGLL1Q99990 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC14.02□□□□□ -0.17
VGLL1Q99990 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC14.02□□□□□ -0.17
VGLL1Q99990 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
VGLL1Q99990 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
VGLL1Q99990 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC14.02□□□□□ -0.17
VGLL1Q99990 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
VGLL1Q99990 AC131212.4-201ENST00000623606 975 ntBASIC14.02□□□□□ -0.17
VGLL1Q99990 MYC-208ENST00000641036 567 ntBASIC14.02□□□□□ -0.17
VGLL1Q99990 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC14.02□□□□□ -0.17
VGLL1Q99990 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
VGLL1Q99990 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
VGLL1Q99990 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
VGLL1Q99990 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC14.02□□□□□ -0.17
VGLL1Q99990 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC14.02□□□□□ -0.17
VGLL1Q99990 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
VGLL1Q99990 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
VGLL1Q99990 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
VGLL1Q99990 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VGLL1Q99990 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VGLL1Q99990 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
VGLL1Q99990 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VGLL1Q99990 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
VGLL1Q99990 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VGLL1Q99990 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VGLL1Q99990 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
VGLL1Q99990 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
VGLL1Q99990 AC112777.1-201ENST00000540175 1423 ntBASIC14.01□□□□□ -0.17
VGLL1Q99990 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC14.01□□□□□ -0.17
VGLL1Q99990 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms