Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC24.52■■□□□ 1.52
ABCA3Q99758 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC24.51■■□□□ 1.51
ABCA3Q99758 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC24.51■■□□□ 1.51
ABCA3Q99758 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
ABCA3Q99758 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC24.51■■□□□ 1.51
ABCA3Q99758 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
ABCA3Q99758 BEX3-201ENST00000361298 921 ntTSL 2 BASIC24.51■■□□□ 1.51
ABCA3Q99758 LBH-203ENST00000404397 543 ntTSL 4 BASIC24.51■■□□□ 1.51
ABCA3Q99758 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC24.51■■□□□ 1.51
ABCA3Q99758 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC24.51■■□□□ 1.51
ABCA3Q99758 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC24.51■■□□□ 1.51
ABCA3Q99758 ETFA-208ENST00000559602 792 ntTSL 3 BASIC24.51■■□□□ 1.51
ABCA3Q99758 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC24.51■■□□□ 1.51
ABCA3Q99758 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
ABCA3Q99758 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC24.51■■□□□ 1.51
ABCA3Q99758 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC24.51■■□□□ 1.51
ABCA3Q99758 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
ABCA3Q99758 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC24.51■■□□□ 1.51
ABCA3Q99758 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
ABCA3Q99758 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
ABCA3Q99758 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
ABCA3Q99758 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
ABCA3Q99758 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC24.5■■□□□ 1.51
ABCA3Q99758 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC24.5■■□□□ 1.51
ABCA3Q99758 AC023274.1-201ENST00000418278 595 ntBASIC24.5■■□□□ 1.51
ABCA3Q99758 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC24.5■■□□□ 1.51
ABCA3Q99758 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC24.5■■□□□ 1.51
ABCA3Q99758 AC125437.2-201ENST00000625180 2167 ntBASIC24.5■■□□□ 1.51
ABCA3Q99758 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC24.5■■□□□ 1.51
ABCA3Q99758 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
ABCA3Q99758 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
ABCA3Q99758 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC24.49■■□□□ 1.51
ABCA3Q99758 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
ABCA3Q99758 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC24.49■■□□□ 1.51
ABCA3Q99758 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC24.49■■□□□ 1.51
ABCA3Q99758 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC24.49■■□□□ 1.51
ABCA3Q99758 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
ABCA3Q99758 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC24.49■■□□□ 1.51
ABCA3Q99758 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
ABCA3Q99758 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC24.49■■□□□ 1.51
ABCA3Q99758 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC24.49■■□□□ 1.51
ABCA3Q99758 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
ABCA3Q99758 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
ABCA3Q99758 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC24.49■■□□□ 1.51
ABCA3Q99758 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
ABCA3Q99758 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
ABCA3Q99758 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC24.49■■□□□ 1.51
ABCA3Q99758 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC24.49■■□□□ 1.51
ABCA3Q99758 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC24.49■■□□□ 1.51
ABCA3Q99758 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
ABCA3Q99758 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC24.49■■□□□ 1.51
ABCA3Q99758 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC24.49■■□□□ 1.51
ABCA3Q99758 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC24.49■■□□□ 1.51
ABCA3Q99758 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
ABCA3Q99758 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
ABCA3Q99758 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC24.48■■□□□ 1.51
ABCA3Q99758 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
ABCA3Q99758 AC002310.6-201ENST00000624451 1377 ntBASIC24.48■■□□□ 1.51
ABCA3Q99758 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC24.48■■□□□ 1.51
ABCA3Q99758 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
ABCA3Q99758 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC24.48■■□□□ 1.51
ABCA3Q99758 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC24.48■■□□□ 1.51
ABCA3Q99758 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC24.48■■□□□ 1.51
ABCA3Q99758 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
ABCA3Q99758 CTNS-203ENST00000399306 803 ntTSL 3 BASIC24.48■■□□□ 1.51
ABCA3Q99758 YBX1P5-201ENST00000509441 847 ntBASIC24.48■■□□□ 1.51
ABCA3Q99758 AC105339.3-201ENST00000560043 636 ntBASIC24.48■■□□□ 1.51
ABCA3Q99758 MIR3687-2-201ENST00000577708 61 ntBASIC24.48■■□□□ 1.51
ABCA3Q99758 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC24.48■■□□□ 1.51
ABCA3Q99758 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
ABCA3Q99758 AC027612.4-201ENST00000605371 583 ntBASIC24.48■■□□□ 1.51
ABCA3Q99758 MIR3687-1-201ENST00000614492 61 ntBASIC24.48■■□□□ 1.51
ABCA3Q99758 AC009154.2-201ENST00000621177 724 ntBASIC24.48■■□□□ 1.51
ABCA3Q99758 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
ABCA3Q99758 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC24.48■■□□□ 1.51
ABCA3Q99758 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC24.48■■□□□ 1.51
ABCA3Q99758 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC24.48■■□□□ 1.51
ABCA3Q99758 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC24.48■■□□□ 1.51
ABCA3Q99758 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC24.48■■□□□ 1.51
ABCA3Q99758 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC24.47■■□□□ 1.51
ABCA3Q99758 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
ABCA3Q99758 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
ABCA3Q99758 AC211486.1-202ENST00000416371 468 ntBASIC24.47■■□□□ 1.51
ABCA3Q99758 AC068472.1-201ENST00000474589 881 ntBASIC24.47■■□□□ 1.51
ABCA3Q99758 AC211476.1-201ENST00000503899 468 ntBASIC24.47■■□□□ 1.51
ABCA3Q99758 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
ABCA3Q99758 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC24.47■■□□□ 1.51
ABCA3Q99758 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
ABCA3Q99758 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
ABCA3Q99758 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC24.47■■□□□ 1.51
ABCA3Q99758 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC24.47■■□□□ 1.51
ABCA3Q99758 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
ABCA3Q99758 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
ABCA3Q99758 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
ABCA3Q99758 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC24.47■■□□□ 1.51
ABCA3Q99758 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC24.47■■□□□ 1.51
ABCA3Q99758 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
ABCA3Q99758 INIP-202ENST00000374236 874 ntTSL 2 BASIC24.47■■□□□ 1.51
ABCA3Q99758 AC073621.1-201ENST00000392730 636 ntBASIC24.47■■□□□ 1.51
ABCA3Q99758 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms