Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDCA3Q99618 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC19.18■□□□□ 0.66
CDCA3Q99618 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CDCA3Q99618 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CDCA3Q99618 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC19.18■□□□□ 0.66
CDCA3Q99618 MED15P5-201ENST00000423150 992 ntBASIC19.18■□□□□ 0.66
CDCA3Q99618 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC19.18■□□□□ 0.66
CDCA3Q99618 RBSN-204ENST00000449050 903 ntTSL 2 BASIC19.18■□□□□ 0.66
CDCA3Q99618 AC021087.4-201ENST00000563761 564 ntBASIC19.18■□□□□ 0.66
CDCA3Q99618 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC19.18■□□□□ 0.66
CDCA3Q99618 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CDCA3Q99618 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
CDCA3Q99618 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDCA3Q99618 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CDCA3Q99618 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDCA3Q99618 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDCA3Q99618 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.18■□□□□ 0.66
CDCA3Q99618 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CDCA3Q99618 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.18■□□□□ 0.66
CDCA3Q99618 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.18■□□□□ 0.66
CDCA3Q99618 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDCA3Q99618 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDCA3Q99618 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CDCA3Q99618 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CDCA3Q99618 NFYC-AS1-201ENST00000606277 1687 ntBASIC19.17■□□□□ 0.66
CDCA3Q99618 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC19.17■□□□□ 0.66
CDCA3Q99618 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CDCA3Q99618 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CDCA3Q99618 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC19.17■□□□□ 0.66
CDCA3Q99618 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CDCA3Q99618 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC19.17■□□□□ 0.66
CDCA3Q99618 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDCA3Q99618 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDCA3Q99618 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.17■□□□□ 0.66
CDCA3Q99618 AL137060.1-201ENST00000618151 2648 ntBASIC19.17■□□□□ 0.66
CDCA3Q99618 MTMR9LP-203ENST00000426597 1545 ntBASIC19.17■□□□□ 0.66
CDCA3Q99618 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDCA3Q99618 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDCA3Q99618 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CDCA3Q99618 CSF3-203ENST00000394148 622 ntTSL 3 BASIC19.17■□□□□ 0.66
CDCA3Q99618 ABCD1P5-201ENST00000445663 754 ntBASIC19.17■□□□□ 0.66
CDCA3Q99618 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC19.17■□□□□ 0.66
CDCA3Q99618 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC19.17■□□□□ 0.66
CDCA3Q99618 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC19.17■□□□□ 0.66
CDCA3Q99618 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
CDCA3Q99618 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDCA3Q99618 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDCA3Q99618 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CDCA3Q99618 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDCA3Q99618 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDCA3Q99618 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDCA3Q99618 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC19.17■□□□□ 0.66
CDCA3Q99618 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDCA3Q99618 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CDCA3Q99618 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDCA3Q99618 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDCA3Q99618 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDCA3Q99618 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CDCA3Q99618 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDCA3Q99618 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDCA3Q99618 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CDCA3Q99618 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDCA3Q99618 LBH-204ENST00000406087 559 ntTSL 4 BASIC19.16■□□□□ 0.66
CDCA3Q99618 UPF3AP3-201ENST00000420996 769 ntBASIC19.16■□□□□ 0.66
CDCA3Q99618 MTCL1P1-201ENST00000446207 792 ntBASIC19.16■□□□□ 0.66
CDCA3Q99618 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC19.16■□□□□ 0.66
CDCA3Q99618 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CDCA3Q99618 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC19.16■□□□□ 0.66
CDCA3Q99618 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC19.16■□□□□ 0.66
CDCA3Q99618 AC140113.2-201ENST00000604370 208 ntBASIC19.16■□□□□ 0.66
CDCA3Q99618 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.16■□□□□ 0.66
CDCA3Q99618 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CDCA3Q99618 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CDCA3Q99618 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CDCA3Q99618 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
CDCA3Q99618 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.16■□□□□ 0.66
CDCA3Q99618 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDCA3Q99618 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDCA3Q99618 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.15■□□□□ 0.66
CDCA3Q99618 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDCA3Q99618 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.15■□□□□ 0.66
CDCA3Q99618 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
CDCA3Q99618 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDCA3Q99618 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
CDCA3Q99618 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDCA3Q99618 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDCA3Q99618 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
CDCA3Q99618 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CDCA3Q99618 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.15■□□□□ 0.66
CDCA3Q99618 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
CDCA3Q99618 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC19.15■□□□□ 0.66
CDCA3Q99618 HNRNPA1P28-201ENST00000424481 961 ntBASIC19.15■□□□□ 0.66
CDCA3Q99618 OR7E14P-202ENST00000530490 1290 ntBASIC19.15■□□□□ 0.66
CDCA3Q99618 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CDCA3Q99618 AL356488.2-201ENST00000602755 427 ntBASIC19.15■□□□□ 0.66
CDCA3Q99618 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.15■□□□□ 0.66
CDCA3Q99618 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC19.15■□□□□ 0.66
CDCA3Q99618 AL356309.3-201ENST00000624132 1934 ntBASIC19.15■□□□□ 0.66
CDCA3Q99618 AC125634.1-201ENST00000438758 1403 ntBASIC19.15■□□□□ 0.66
CDCA3Q99618 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms