Protein–RNA interactions for Protein: Q96NL6

SCLT1, Sodium channel and clathrin linker 1, humanhuman

Predictions only

Length 688 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1Q96NL6 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SCLT1Q96NL6 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SCLT1Q96NL6 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SCLT1Q96NL6 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
SCLT1Q96NL6 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.89
SCLT1Q96NL6 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SCLT1Q96NL6 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC20.58■□□□□ 0.89
SCLT1Q96NL6 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC20.58■□□□□ 0.89
SCLT1Q96NL6 SEC1P-202ENST00000473944 940 ntBASIC20.58■□□□□ 0.89
SCLT1Q96NL6 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SCLT1Q96NL6 NMU-205ENST00000511469 756 ntTSL 3 BASIC20.58■□□□□ 0.89
SCLT1Q96NL6 LY6E-213ENST00000522528 606 ntTSL 3 BASIC20.58■□□□□ 0.89
SCLT1Q96NL6 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
SCLT1Q96NL6 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC20.58■□□□□ 0.89
SCLT1Q96NL6 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC20.58■□□□□ 0.89
SCLT1Q96NL6 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC20.58■□□□□ 0.89
SCLT1Q96NL6 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC20.58■□□□□ 0.89
SCLT1Q96NL6 HYMAI.1-201ENST00000620949 238 ntBASIC20.58■□□□□ 0.89
SCLT1Q96NL6 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC20.58■□□□□ 0.89
SCLT1Q96NL6 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC20.58■□□□□ 0.89
SCLT1Q96NL6 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SCLT1Q96NL6 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
SCLT1Q96NL6 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SCLT1Q96NL6 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.88
SCLT1Q96NL6 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC20.58■□□□□ 0.88
SCLT1Q96NL6 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC20.58■□□□□ 0.88
SCLT1Q96NL6 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
SCLT1Q96NL6 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
SCLT1Q96NL6 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SCLT1Q96NL6 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC20.57■□□□□ 0.88
SCLT1Q96NL6 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SCLT1Q96NL6 KRT8P32-201ENST00000512863 1461 ntBASIC20.57■□□□□ 0.88
SCLT1Q96NL6 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
SCLT1Q96NL6 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SCLT1Q96NL6 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SCLT1Q96NL6 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SCLT1Q96NL6 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SCLT1Q96NL6 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SCLT1Q96NL6 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SCLT1Q96NL6 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC20.57■□□□□ 0.88
SCLT1Q96NL6 AC092597.1-201ENST00000487352 616 ntBASIC20.57■□□□□ 0.88
SCLT1Q96NL6 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC20.57■□□□□ 0.88
SCLT1Q96NL6 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SCLT1Q96NL6 USF2-205ENST00000594064 1179 ntTSL 2 BASIC20.57■□□□□ 0.88
SCLT1Q96NL6 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC20.57■□□□□ 0.88
SCLT1Q96NL6 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
SCLT1Q96NL6 AC004408.2-201ENST00000623613 2777 ntBASIC20.57■□□□□ 0.88
SCLT1Q96NL6 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
SCLT1Q96NL6 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SCLT1Q96NL6 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SCLT1Q96NL6 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SCLT1Q96NL6 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC20.57■□□□□ 0.88
SCLT1Q96NL6 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SCLT1Q96NL6 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
SCLT1Q96NL6 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SCLT1Q96NL6 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SCLT1Q96NL6 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SCLT1Q96NL6 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SCLT1Q96NL6 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
SCLT1Q96NL6 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
SCLT1Q96NL6 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SCLT1Q96NL6 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SCLT1Q96NL6 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC20.56■□□□□ 0.88
SCLT1Q96NL6 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SCLT1Q96NL6 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
SCLT1Q96NL6 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SCLT1Q96NL6 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
SCLT1Q96NL6 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
SCLT1Q96NL6 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC20.56■□□□□ 0.88
SCLT1Q96NL6 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SCLT1Q96NL6 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SCLT1Q96NL6 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC20.56■□□□□ 0.88
SCLT1Q96NL6 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC20.56■□□□□ 0.88
SCLT1Q96NL6 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC20.56■□□□□ 0.88
SCLT1Q96NL6 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC20.56■□□□□ 0.88
SCLT1Q96NL6 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC20.56■□□□□ 0.88
SCLT1Q96NL6 AC069148.1-201ENST00000608741 768 ntBASIC20.56■□□□□ 0.88
SCLT1Q96NL6 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC20.56■□□□□ 0.88
SCLT1Q96NL6 AL157888.1-201ENST00000631930 593 ntBASIC20.56■□□□□ 0.88
SCLT1Q96NL6 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SCLT1Q96NL6 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SCLT1Q96NL6 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SCLT1Q96NL6 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
SCLT1Q96NL6 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SCLT1Q96NL6 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SCLT1Q96NL6 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC20.56■□□□□ 0.88
SCLT1Q96NL6 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SCLT1Q96NL6 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SCLT1Q96NL6 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
SCLT1Q96NL6 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
SCLT1Q96NL6 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC20.55■□□□□ 0.88
SCLT1Q96NL6 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SCLT1Q96NL6 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC20.55■□□□□ 0.88
SCLT1Q96NL6 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC20.55■□□□□ 0.88
SCLT1Q96NL6 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SCLT1Q96NL6 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC20.55■□□□□ 0.88
SCLT1Q96NL6 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SCLT1Q96NL6 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC20.55■□□□□ 0.88
SCLT1Q96NL6 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
SCLT1Q96NL6 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms