Protein–RNA interactions for Protein: Q96NG5

ZNF558, Zinc finger protein 558, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558Q96NG5 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
ZNF558Q96NG5 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
ZNF558Q96NG5 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.61■□□□□ 0.73
ZNF558Q96NG5 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.6■□□□□ 0.73
ZNF558Q96NG5 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
ZNF558Q96NG5 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ZNF558Q96NG5 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
ZNF558Q96NG5 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ZNF558Q96NG5 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.6■□□□□ 0.73
ZNF558Q96NG5 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
ZNF558Q96NG5 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
ZNF558Q96NG5 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
ZNF558Q96NG5 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ZNF558Q96NG5 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ZNF558Q96NG5 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ZNF558Q96NG5 EMD-201ENST00000369835 966 ntTSL 3 BASIC19.6■□□□□ 0.73
ZNF558Q96NG5 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ZNF558Q96NG5 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC19.6■□□□□ 0.73
ZNF558Q96NG5 AL590627.1-203ENST00000421194 1026 ntBASIC19.6■□□□□ 0.73
ZNF558Q96NG5 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ZNF558Q96NG5 PPIE-208ENST00000470213 927 ntTSL 3 BASIC19.6■□□□□ 0.73
ZNF558Q96NG5 AC096582.2-201ENST00000510860 516 ntBASIC19.6■□□□□ 0.73
ZNF558Q96NG5 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ZNF558Q96NG5 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
ZNF558Q96NG5 TP73-AS1-207ENST00000624167 988 ntBASIC19.6■□□□□ 0.73
ZNF558Q96NG5 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.6■□□□□ 0.73
ZNF558Q96NG5 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
ZNF558Q96NG5 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
ZNF558Q96NG5 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ZNF558Q96NG5 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
ZNF558Q96NG5 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ZNF558Q96NG5 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ZNF558Q96NG5 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
ZNF558Q96NG5 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
ZNF558Q96NG5 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ZNF558Q96NG5 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ZNF558Q96NG5 TEX30-205ENST00000376029 959 ntTSL 2 BASIC19.59■□□□□ 0.73
ZNF558Q96NG5 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC19.59■□□□□ 0.73
ZNF558Q96NG5 AC113404.2-201ENST00000507884 177 ntBASIC19.59■□□□□ 0.73
ZNF558Q96NG5 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
ZNF558Q96NG5 AP001005.1-201ENST00000571755 1248 ntBASIC19.59■□□□□ 0.73
ZNF558Q96NG5 MIR5100-201ENST00000579544 119 ntBASIC19.59■□□□□ 0.73
ZNF558Q96NG5 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC19.59■□□□□ 0.73
ZNF558Q96NG5 GPALPP1-207ENST00000611650 899 ntBASIC19.59■□□□□ 0.73
ZNF558Q96NG5 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC19.59■□□□□ 0.73
ZNF558Q96NG5 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
ZNF558Q96NG5 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ZNF558Q96NG5 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC19.59■□□□□ 0.73
ZNF558Q96NG5 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ZNF558Q96NG5 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
ZNF558Q96NG5 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
ZNF558Q96NG5 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.59■□□□□ 0.73
ZNF558Q96NG5 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.59■□□□□ 0.73
ZNF558Q96NG5 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
ZNF558Q96NG5 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.58■□□□□ 0.73
ZNF558Q96NG5 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC19.58■□□□□ 0.73
ZNF558Q96NG5 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
ZNF558Q96NG5 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
ZNF558Q96NG5 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.58■□□□□ 0.73
ZNF558Q96NG5 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
ZNF558Q96NG5 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
ZNF558Q96NG5 ASL-204ENST00000395331 1538 ntTSL 5 BASIC19.58■□□□□ 0.73
ZNF558Q96NG5 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
ZNF558Q96NG5 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
ZNF558Q96NG5 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
ZNF558Q96NG5 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC19.58■□□□□ 0.72
ZNF558Q96NG5 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC19.58■□□□□ 0.72
ZNF558Q96NG5 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC19.58■□□□□ 0.72
ZNF558Q96NG5 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC19.58■□□□□ 0.72
ZNF558Q96NG5 MOK-208ENST00000519058 917 ntTSL 2 BASIC19.58■□□□□ 0.72
ZNF558Q96NG5 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC19.58■□□□□ 0.72
ZNF558Q96NG5 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC19.58■□□□□ 0.72
ZNF558Q96NG5 AC114341.1-201ENST00000618070 349 ntBASIC19.58■□□□□ 0.72
ZNF558Q96NG5 AC083906.6-201ENST00000641366 219 ntBASIC19.58■□□□□ 0.72
ZNF558Q96NG5 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
ZNF558Q96NG5 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
ZNF558Q96NG5 AC009102.3-201ENST00000623118 1491 ntBASIC19.58■□□□□ 0.72
ZNF558Q96NG5 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC19.58■□□□□ 0.72
ZNF558Q96NG5 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
ZNF558Q96NG5 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
ZNF558Q96NG5 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
ZNF558Q96NG5 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
ZNF558Q96NG5 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
ZNF558Q96NG5 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
ZNF558Q96NG5 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC19.57■□□□□ 0.72
ZNF558Q96NG5 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.57■□□□□ 0.72
ZNF558Q96NG5 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ZNF558Q96NG5 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ZNF558Q96NG5 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ZNF558Q96NG5 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ZNF558Q96NG5 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
ZNF558Q96NG5 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
ZNF558Q96NG5 FAM197Y8-203ENST00000450145 560 ntBASIC19.57■□□□□ 0.72
ZNF558Q96NG5 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC19.57■□□□□ 0.72
ZNF558Q96NG5 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC19.57■□□□□ 0.72
ZNF558Q96NG5 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC19.57■□□□□ 0.72
ZNF558Q96NG5 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC19.57■□□□□ 0.72
ZNF558Q96NG5 AL773604.1-201ENST00000617417 272 ntBASIC19.57■□□□□ 0.72
ZNF558Q96NG5 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
ZNF558Q96NG5 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms