Protein–RNA interactions for Protein: Q96JH7

VCPIP1, Deubiquitinating protein VCIP135, humanhuman

Predictions only

Length 1,222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPIP1Q96JH7 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
VCPIP1Q96JH7 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
VCPIP1Q96JH7 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC19.46■□□□□ 0.71
VCPIP1Q96JH7 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
VCPIP1Q96JH7 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
VCPIP1Q96JH7 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
VCPIP1Q96JH7 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
VCPIP1Q96JH7 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC19.46■□□□□ 0.71
VCPIP1Q96JH7 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC19.46■□□□□ 0.71
VCPIP1Q96JH7 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
VCPIP1Q96JH7 AL512604.3-201ENST00000569583 964 ntBASIC19.46■□□□□ 0.71
VCPIP1Q96JH7 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
VCPIP1Q96JH7 AC112497.1-201ENST00000624824 639 ntBASIC19.46■□□□□ 0.71
VCPIP1Q96JH7 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
VCPIP1Q96JH7 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
VCPIP1Q96JH7 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
VCPIP1Q96JH7 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
VCPIP1Q96JH7 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC19.46■□□□□ 0.71
VCPIP1Q96JH7 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.46■□□□□ 0.71
VCPIP1Q96JH7 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.46■□□□□ 0.71
VCPIP1Q96JH7 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
VCPIP1Q96JH7 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
VCPIP1Q96JH7 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC19.46■□□□□ 0.71
VCPIP1Q96JH7 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
VCPIP1Q96JH7 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
VCPIP1Q96JH7 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
VCPIP1Q96JH7 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC19.45■□□□□ 0.7
VCPIP1Q96JH7 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
VCPIP1Q96JH7 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
VCPIP1Q96JH7 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC19.45■□□□□ 0.7
VCPIP1Q96JH7 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
VCPIP1Q96JH7 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
VCPIP1Q96JH7 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
VCPIP1Q96JH7 KRT8P9-201ENST00000558927 1449 ntBASIC19.45■□□□□ 0.7
VCPIP1Q96JH7 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
VCPIP1Q96JH7 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
VCPIP1Q96JH7 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
VCPIP1Q96JH7 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
VCPIP1Q96JH7 AC087499.1-201ENST00000418141 1075 ntBASIC19.45■□□□□ 0.7
VCPIP1Q96JH7 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC19.45■□□□□ 0.7
VCPIP1Q96JH7 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC19.45■□□□□ 0.7
VCPIP1Q96JH7 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC19.45■□□□□ 0.7
VCPIP1Q96JH7 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC19.45■□□□□ 0.7
VCPIP1Q96JH7 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC19.45■□□□□ 0.7
VCPIP1Q96JH7 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
VCPIP1Q96JH7 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
VCPIP1Q96JH7 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
VCPIP1Q96JH7 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC19.45■□□□□ 0.7
VCPIP1Q96JH7 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC19.45■□□□□ 0.7
VCPIP1Q96JH7 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
VCPIP1Q96JH7 FLYWCH1P1-201ENST00000460917 1874 ntBASIC19.45■□□□□ 0.7
VCPIP1Q96JH7 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
VCPIP1Q96JH7 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
VCPIP1Q96JH7 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
VCPIP1Q96JH7 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
VCPIP1Q96JH7 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC19.45■□□□□ 0.7
VCPIP1Q96JH7 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
VCPIP1Q96JH7 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
VCPIP1Q96JH7 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
VCPIP1Q96JH7 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
VCPIP1Q96JH7 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
VCPIP1Q96JH7 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
VCPIP1Q96JH7 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC19.45■□□□□ 0.7
VCPIP1Q96JH7 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC19.44■□□□□ 0.7
VCPIP1Q96JH7 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
VCPIP1Q96JH7 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
VCPIP1Q96JH7 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC19.44■□□□□ 0.7
VCPIP1Q96JH7 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
VCPIP1Q96JH7 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
VCPIP1Q96JH7 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
VCPIP1Q96JH7 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
VCPIP1Q96JH7 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
VCPIP1Q96JH7 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
VCPIP1Q96JH7 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
VCPIP1Q96JH7 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
VCPIP1Q96JH7 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
VCPIP1Q96JH7 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC19.44■□□□□ 0.7
VCPIP1Q96JH7 INGX-201ENST00000359239 846 ntBASIC19.44■□□□□ 0.7
VCPIP1Q96JH7 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
VCPIP1Q96JH7 GRAMD4P1-201ENST00000435181 1110 ntBASIC19.44■□□□□ 0.7
VCPIP1Q96JH7 ETFA-216ENST00000560726 942 ntTSL 3 BASIC19.44■□□□□ 0.7
VCPIP1Q96JH7 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC19.44■□□□□ 0.7
VCPIP1Q96JH7 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC19.44■□□□□ 0.7
VCPIP1Q96JH7 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
VCPIP1Q96JH7 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC19.44■□□□□ 0.7
VCPIP1Q96JH7 NOC2LP2-201ENST00000407594 1944 ntBASIC19.44■□□□□ 0.7
VCPIP1Q96JH7 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC19.44■□□□□ 0.7
VCPIP1Q96JH7 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
VCPIP1Q96JH7 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
VCPIP1Q96JH7 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC19.44■□□□□ 0.7
VCPIP1Q96JH7 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19.44■□□□□ 0.7
VCPIP1Q96JH7 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC19.44■□□□□ 0.7
VCPIP1Q96JH7 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
VCPIP1Q96JH7 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.44■□□□□ 0.7
VCPIP1Q96JH7 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
VCPIP1Q96JH7 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
VCPIP1Q96JH7 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
VCPIP1Q96JH7 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
VCPIP1Q96JH7 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
VCPIP1Q96JH7 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 66.1 ms