Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
PDLIM5Q96HC4 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PDLIM5Q96HC4 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.05■□□□□ 0.48
PDLIM5Q96HC4 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PDLIM5Q96HC4 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PDLIM5Q96HC4 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
PDLIM5Q96HC4 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.05■□□□□ 0.48
PDLIM5Q96HC4 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PDLIM5Q96HC4 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PDLIM5Q96HC4 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PDLIM5Q96HC4 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
PDLIM5Q96HC4 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PDLIM5Q96HC4 AC093827.2-201ENST00000512654 315 ntBASIC18.05■□□□□ 0.48
PDLIM5Q96HC4 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC18.05■□□□□ 0.48
PDLIM5Q96HC4 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PDLIM5Q96HC4 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC18.05■□□□□ 0.48
PDLIM5Q96HC4 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC18.05■□□□□ 0.48
PDLIM5Q96HC4 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC18.05■□□□□ 0.48
PDLIM5Q96HC4 FAM87A-204ENST00000613235 858 ntBASIC18.05■□□□□ 0.48
PDLIM5Q96HC4 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PDLIM5Q96HC4 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PDLIM5Q96HC4 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PDLIM5Q96HC4 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PDLIM5Q96HC4 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PDLIM5Q96HC4 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.05■□□□□ 0.48
PDLIM5Q96HC4 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.05■□□□□ 0.48
PDLIM5Q96HC4 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
PDLIM5Q96HC4 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
PDLIM5Q96HC4 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.05■□□□□ 0.48
PDLIM5Q96HC4 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
PDLIM5Q96HC4 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
PDLIM5Q96HC4 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC18.04■□□□□ 0.48
PDLIM5Q96HC4 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.04■□□□□ 0.48
PDLIM5Q96HC4 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PDLIM5Q96HC4 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.04■□□□□ 0.48
PDLIM5Q96HC4 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
PDLIM5Q96HC4 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
PDLIM5Q96HC4 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.04■□□□□ 0.48
PDLIM5Q96HC4 NOC2LP2-201ENST00000407594 1944 ntBASIC18.04■□□□□ 0.48
PDLIM5Q96HC4 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PDLIM5Q96HC4 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC18.04■□□□□ 0.48
PDLIM5Q96HC4 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.04■□□□□ 0.48
PDLIM5Q96HC4 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PDLIM5Q96HC4 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PDLIM5Q96HC4 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
PDLIM5Q96HC4 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PDLIM5Q96HC4 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
PDLIM5Q96HC4 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PDLIM5Q96HC4 HMGA1P5-201ENST00000412453 271 ntBASIC18.04■□□□□ 0.48
PDLIM5Q96HC4 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PDLIM5Q96HC4 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC18.04■□□□□ 0.48
PDLIM5Q96HC4 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
PDLIM5Q96HC4 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC18.04■□□□□ 0.48
PDLIM5Q96HC4 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC18.04■□□□□ 0.48
PDLIM5Q96HC4 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PDLIM5Q96HC4 AC066615.1-201ENST00000640911 628 ntBASIC18.04■□□□□ 0.48
PDLIM5Q96HC4 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
PDLIM5Q96HC4 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PDLIM5Q96HC4 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC18.04■□□□□ 0.48
PDLIM5Q96HC4 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PDLIM5Q96HC4 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
PDLIM5Q96HC4 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PDLIM5Q96HC4 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC18.03■□□□□ 0.48
PDLIM5Q96HC4 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PDLIM5Q96HC4 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
PDLIM5Q96HC4 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PDLIM5Q96HC4 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PDLIM5Q96HC4 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PDLIM5Q96HC4 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PDLIM5Q96HC4 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PDLIM5Q96HC4 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC18.03■□□□□ 0.48
PDLIM5Q96HC4 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PDLIM5Q96HC4 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
PDLIM5Q96HC4 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PDLIM5Q96HC4 SLC25A6P5-201ENST00000435663 894 ntBASIC18.03■□□□□ 0.48
PDLIM5Q96HC4 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PDLIM5Q96HC4 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC18.03■□□□□ 0.48
PDLIM5Q96HC4 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC18.03■□□□□ 0.48
PDLIM5Q96HC4 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PDLIM5Q96HC4 NEK4P2-201ENST00000580004 1012 ntBASIC18.03■□□□□ 0.48
PDLIM5Q96HC4 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PDLIM5Q96HC4 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PDLIM5Q96HC4 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.03■□□□□ 0.48
PDLIM5Q96HC4 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
PDLIM5Q96HC4 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PDLIM5Q96HC4 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
PDLIM5Q96HC4 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
PDLIM5Q96HC4 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PDLIM5Q96HC4 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PDLIM5Q96HC4 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PDLIM5Q96HC4 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC18.03■□□□□ 0.48
PDLIM5Q96HC4 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PDLIM5Q96HC4 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
PDLIM5Q96HC4 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.02■□□□□ 0.48
PDLIM5Q96HC4 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PDLIM5Q96HC4 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC18.02■□□□□ 0.48
PDLIM5Q96HC4 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC18.02■□□□□ 0.48
PDLIM5Q96HC4 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.02■□□□□ 0.48
PDLIM5Q96HC4 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.48
PDLIM5Q96HC4 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms