Protein–RNA interactions for Protein: Q96EA4

SPDL1, Protein Spindly, humanhuman

Predictions only

Length 605 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDL1Q96EA4 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
SPDL1Q96EA4 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
SPDL1Q96EA4 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
SPDL1Q96EA4 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
SPDL1Q96EA4 NF2-208ENST00000403435 2568 ntTSL 5 BASIC18.24■□□□□ 0.51
SPDL1Q96EA4 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SPDL1Q96EA4 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SPDL1Q96EA4 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
SPDL1Q96EA4 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SPDL1Q96EA4 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC18.23■□□□□ 0.51
SPDL1Q96EA4 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.23■□□□□ 0.51
SPDL1Q96EA4 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC18.23■□□□□ 0.51
SPDL1Q96EA4 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC18.23■□□□□ 0.51
SPDL1Q96EA4 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SPDL1Q96EA4 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC18.23■□□□□ 0.51
SPDL1Q96EA4 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC18.23■□□□□ 0.51
SPDL1Q96EA4 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
SPDL1Q96EA4 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
SPDL1Q96EA4 MIPEPP3-201ENST00000412105 444 ntBASIC18.23■□□□□ 0.51
SPDL1Q96EA4 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC18.23■□□□□ 0.51
SPDL1Q96EA4 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SPDL1Q96EA4 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC18.23■□□□□ 0.51
SPDL1Q96EA4 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
SPDL1Q96EA4 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SPDL1Q96EA4 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.23■□□□□ 0.51
SPDL1Q96EA4 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
SPDL1Q96EA4 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
SPDL1Q96EA4 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SPDL1Q96EA4 AC135776.1-201ENST00000319817 2481 ntBASIC18.23■□□□□ 0.51
SPDL1Q96EA4 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC18.23■□□□□ 0.51
SPDL1Q96EA4 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC18.23■□□□□ 0.51
SPDL1Q96EA4 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
SPDL1Q96EA4 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SPDL1Q96EA4 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SPDL1Q96EA4 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
SPDL1Q96EA4 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC18.22■□□□□ 0.51
SPDL1Q96EA4 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
SPDL1Q96EA4 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SPDL1Q96EA4 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SPDL1Q96EA4 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.22■□□□□ 0.51
SPDL1Q96EA4 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
SPDL1Q96EA4 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC18.22■□□□□ 0.51
SPDL1Q96EA4 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
SPDL1Q96EA4 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SPDL1Q96EA4 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SPDL1Q96EA4 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
SPDL1Q96EA4 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SPDL1Q96EA4 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SPDL1Q96EA4 MIR663A-201ENST00000385250 93 ntBASIC18.22■□□□□ 0.51
SPDL1Q96EA4 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC18.22■□□□□ 0.51
SPDL1Q96EA4 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SPDL1Q96EA4 TUBB8P6-201ENST00000436895 1288 ntBASIC18.22■□□□□ 0.51
SPDL1Q96EA4 PNN-205ENST00000556530 601 ntTSL 2 BASIC18.22■□□□□ 0.51
SPDL1Q96EA4 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SPDL1Q96EA4 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC18.22■□□□□ 0.51
SPDL1Q96EA4 AD000864.1-201ENST00000624076 2295 ntBASIC18.22■□□□□ 0.51
SPDL1Q96EA4 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC18.22■□□□□ 0.51
SPDL1Q96EA4 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SPDL1Q96EA4 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
SPDL1Q96EA4 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SPDL1Q96EA4 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SPDL1Q96EA4 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
SPDL1Q96EA4 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.22■□□□□ 0.51
SPDL1Q96EA4 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
SPDL1Q96EA4 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC18.22■□□□□ 0.51
SPDL1Q96EA4 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SPDL1Q96EA4 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
SPDL1Q96EA4 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
SPDL1Q96EA4 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SPDL1Q96EA4 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
SPDL1Q96EA4 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SPDL1Q96EA4 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.21■□□□□ 0.51
SPDL1Q96EA4 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SPDL1Q96EA4 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SPDL1Q96EA4 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
SPDL1Q96EA4 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SPDL1Q96EA4 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC18.21■□□□□ 0.51
SPDL1Q96EA4 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SPDL1Q96EA4 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC18.21■□□□□ 0.51
SPDL1Q96EA4 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SPDL1Q96EA4 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
SPDL1Q96EA4 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
SPDL1Q96EA4 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
SPDL1Q96EA4 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SPDL1Q96EA4 METTL15-202ENST00000403099 795 ntTSL 5 BASIC18.21■□□□□ 0.51
SPDL1Q96EA4 CDCA4P2-201ENST00000441182 718 ntBASIC18.21■□□□□ 0.51
SPDL1Q96EA4 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC18.21■□□□□ 0.51
SPDL1Q96EA4 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC18.21■□□□□ 0.51
SPDL1Q96EA4 OAS3-207ENST00000551007 998 ntTSL 2 BASIC18.21■□□□□ 0.51
SPDL1Q96EA4 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC18.21■□□□□ 0.51
SPDL1Q96EA4 MIR5787-201ENST00000611784 55 ntBASIC18.21■□□□□ 0.51
SPDL1Q96EA4 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC18.21■□□□□ 0.51
SPDL1Q96EA4 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SPDL1Q96EA4 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
SPDL1Q96EA4 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
SPDL1Q96EA4 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SPDL1Q96EA4 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SPDL1Q96EA4 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
SPDL1Q96EA4 CROCCP1-201ENST00000426910 5675 ntBASIC18.21■□□□□ 0.51
SPDL1Q96EA4 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms