Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
RTP4Q96DX8 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RTP4Q96DX8 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RTP4Q96DX8 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
RTP4Q96DX8 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RTP4Q96DX8 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.85■□□□□ 0.61
RTP4Q96DX8 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
RTP4Q96DX8 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RTP4Q96DX8 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC18.85■□□□□ 0.61
RTP4Q96DX8 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RTP4Q96DX8 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RTP4Q96DX8 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RTP4Q96DX8 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RTP4Q96DX8 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
RTP4Q96DX8 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.84■□□□□ 0.61
RTP4Q96DX8 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RTP4Q96DX8 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
RTP4Q96DX8 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RTP4Q96DX8 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RTP4Q96DX8 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC18.84■□□□□ 0.61
RTP4Q96DX8 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC18.84■□□□□ 0.61
RTP4Q96DX8 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC18.84■□□□□ 0.61
RTP4Q96DX8 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
RTP4Q96DX8 AP000525.1-201ENST00000608286 694 ntBASIC18.84■□□□□ 0.61
RTP4Q96DX8 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RTP4Q96DX8 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RTP4Q96DX8 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.84■□□□□ 0.61
RTP4Q96DX8 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
RTP4Q96DX8 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RTP4Q96DX8 FLJ13224-201ENST00000313737 1514 ntBASIC18.84■□□□□ 0.61
RTP4Q96DX8 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RTP4Q96DX8 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RTP4Q96DX8 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RTP4Q96DX8 AC009102.3-201ENST00000623118 1491 ntBASIC18.84■□□□□ 0.61
RTP4Q96DX8 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.83■□□□□ 0.61
RTP4Q96DX8 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.61
RTP4Q96DX8 PHGDH-209ENST00000641074 1780 ntBASIC18.83■□□□□ 0.61
RTP4Q96DX8 REXO1L9P-201ENST00000604264 2108 ntBASIC18.83■□□□□ 0.61
RTP4Q96DX8 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
RTP4Q96DX8 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
RTP4Q96DX8 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RTP4Q96DX8 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RTP4Q96DX8 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC18.83■□□□□ 0.6
RTP4Q96DX8 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RTP4Q96DX8 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
RTP4Q96DX8 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
RTP4Q96DX8 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
RTP4Q96DX8 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC18.83■□□□□ 0.6
RTP4Q96DX8 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC18.83■□□□□ 0.6
RTP4Q96DX8 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RTP4Q96DX8 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RTP4Q96DX8 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RTP4Q96DX8 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC18.83■□□□□ 0.6
RTP4Q96DX8 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.83■□□□□ 0.6
RTP4Q96DX8 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RTP4Q96DX8 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.83■□□□□ 0.6
RTP4Q96DX8 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RTP4Q96DX8 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RTP4Q96DX8 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
RTP4Q96DX8 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RTP4Q96DX8 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.83■□□□□ 0.6
RTP4Q96DX8 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.83■□□□□ 0.6
RTP4Q96DX8 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RTP4Q96DX8 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
RTP4Q96DX8 AL096828.2-201ENST00000567259 1965 ntBASIC18.82■□□□□ 0.6
RTP4Q96DX8 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RTP4Q96DX8 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC18.82■□□□□ 0.6
RTP4Q96DX8 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RTP4Q96DX8 AC026471.1-201ENST00000564629 3026 ntBASIC18.82■□□□□ 0.6
RTP4Q96DX8 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.82■□□□□ 0.6
RTP4Q96DX8 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.82■□□□□ 0.6
RTP4Q96DX8 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
RTP4Q96DX8 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
RTP4Q96DX8 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
RTP4Q96DX8 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RTP4Q96DX8 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RTP4Q96DX8 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
RTP4Q96DX8 CCR12P-201ENST00000446203 998 ntBASIC18.82■□□□□ 0.6
RTP4Q96DX8 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RTP4Q96DX8 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC18.82■□□□□ 0.6
RTP4Q96DX8 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC18.82■□□□□ 0.6
RTP4Q96DX8 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RTP4Q96DX8 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC18.82■□□□□ 0.6
RTP4Q96DX8 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RTP4Q96DX8 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.82■□□□□ 0.6
RTP4Q96DX8 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RTP4Q96DX8 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.82■□□□□ 0.6
RTP4Q96DX8 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RTP4Q96DX8 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.82■□□□□ 0.6
RTP4Q96DX8 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RTP4Q96DX8 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.81■□□□□ 0.6
RTP4Q96DX8 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RTP4Q96DX8 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.81■□□□□ 0.6
RTP4Q96DX8 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
RTP4Q96DX8 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC18.81■□□□□ 0.6
RTP4Q96DX8 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.81■□□□□ 0.6
RTP4Q96DX8 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC18.81■□□□□ 0.6
RTP4Q96DX8 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RTP4Q96DX8 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RTP4Q96DX8 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms