Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SH3KBP1Q96B97 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SH3KBP1Q96B97 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SH3KBP1Q96B97 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SH3KBP1Q96B97 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SH3KBP1Q96B97 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SH3KBP1Q96B97 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SH3KBP1Q96B97 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SH3KBP1Q96B97 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SH3KBP1Q96B97 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SH3KBP1Q96B97 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC18.3■□□□□ 0.52
SH3KBP1Q96B97 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SH3KBP1Q96B97 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SH3KBP1Q96B97 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SH3KBP1Q96B97 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SH3KBP1Q96B97 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
SH3KBP1Q96B97 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SH3KBP1Q96B97 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC18.3■□□□□ 0.52
SH3KBP1Q96B97 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
SH3KBP1Q96B97 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SH3KBP1Q96B97 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
SH3KBP1Q96B97 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
SH3KBP1Q96B97 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
SH3KBP1Q96B97 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC18.3■□□□□ 0.52
SH3KBP1Q96B97 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC18.3■□□□□ 0.52
SH3KBP1Q96B97 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC18.3■□□□□ 0.52
SH3KBP1Q96B97 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SH3KBP1Q96B97 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SH3KBP1Q96B97 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC18.3■□□□□ 0.52
SH3KBP1Q96B97 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SH3KBP1Q96B97 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
SH3KBP1Q96B97 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SH3KBP1Q96B97 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SH3KBP1Q96B97 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SH3KBP1Q96B97 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SH3KBP1Q96B97 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SH3KBP1Q96B97 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SH3KBP1Q96B97 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SH3KBP1Q96B97 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC18.3■□□□□ 0.52
SH3KBP1Q96B97 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SH3KBP1Q96B97 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SH3KBP1Q96B97 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SH3KBP1Q96B97 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
SH3KBP1Q96B97 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SH3KBP1Q96B97 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
SH3KBP1Q96B97 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SH3KBP1Q96B97 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC18.29■□□□□ 0.52
SH3KBP1Q96B97 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.29■□□□□ 0.52
SH3KBP1Q96B97 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC18.29■□□□□ 0.52
SH3KBP1Q96B97 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SH3KBP1Q96B97 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SH3KBP1Q96B97 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SH3KBP1Q96B97 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SH3KBP1Q96B97 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC18.29■□□□□ 0.52
SH3KBP1Q96B97 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC18.29■□□□□ 0.52
SH3KBP1Q96B97 AL023284.2-201ENST00000405850 579 ntBASIC18.29■□□□□ 0.52
SH3KBP1Q96B97 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC18.29■□□□□ 0.52
SH3KBP1Q96B97 ETFA-216ENST00000560726 942 ntTSL 3 BASIC18.29■□□□□ 0.52
SH3KBP1Q96B97 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
SH3KBP1Q96B97 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SH3KBP1Q96B97 AC091076.1-201ENST00000610741 619 ntBASIC18.29■□□□□ 0.52
SH3KBP1Q96B97 MYC-208ENST00000641036 567 ntBASIC18.29■□□□□ 0.52
SH3KBP1Q96B97 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SH3KBP1Q96B97 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SH3KBP1Q96B97 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
SH3KBP1Q96B97 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SH3KBP1Q96B97 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SH3KBP1Q96B97 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
SH3KBP1Q96B97 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC18.29■□□□□ 0.52
SH3KBP1Q96B97 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
SH3KBP1Q96B97 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC18.29■□□□□ 0.52
SH3KBP1Q96B97 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.28■□□□□ 0.52
SH3KBP1Q96B97 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC18.28■□□□□ 0.52
SH3KBP1Q96B97 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
SH3KBP1Q96B97 GPAT2P1-201ENST00000444924 1672 ntBASIC18.28■□□□□ 0.52
SH3KBP1Q96B97 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC18.28■□□□□ 0.52
SH3KBP1Q96B97 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
SH3KBP1Q96B97 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
SH3KBP1Q96B97 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SH3KBP1Q96B97 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SH3KBP1Q96B97 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SH3KBP1Q96B97 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SH3KBP1Q96B97 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SH3KBP1Q96B97 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SH3KBP1Q96B97 ILF2-202ENST00000368681 726 ntTSL 2 BASIC18.28■□□□□ 0.52
SH3KBP1Q96B97 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
SH3KBP1Q96B97 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SH3KBP1Q96B97 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC18.28■□□□□ 0.52
SH3KBP1Q96B97 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
SH3KBP1Q96B97 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
SH3KBP1Q96B97 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC18.28■□□□□ 0.52
SH3KBP1Q96B97 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC18.28■□□□□ 0.52
SH3KBP1Q96B97 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC18.28■□□□□ 0.52
SH3KBP1Q96B97 CLN6-204ENST00000564752 900 ntTSL 3 BASIC18.28■□□□□ 0.52
SH3KBP1Q96B97 MIR3180-5-201ENST00000583743 153 ntBASIC18.28■□□□□ 0.52
SH3KBP1Q96B97 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC18.28■□□□□ 0.52
SH3KBP1Q96B97 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SH3KBP1Q96B97 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC18.28■□□□□ 0.52
SH3KBP1Q96B97 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SH3KBP1Q96B97 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms