Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CPNE4Q96A23 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CPNE4Q96A23 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CPNE4Q96A23 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CPNE4Q96A23 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CPNE4Q96A23 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CPNE4Q96A23 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC16.59■□□□□ 0.25
CPNE4Q96A23 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC16.59■□□□□ 0.25
CPNE4Q96A23 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CPNE4Q96A23 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC16.59■□□□□ 0.25
CPNE4Q96A23 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC16.59■□□□□ 0.25
CPNE4Q96A23 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CPNE4Q96A23 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CPNE4Q96A23 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC16.59■□□□□ 0.25
CPNE4Q96A23 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC16.59■□□□□ 0.25
CPNE4Q96A23 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CPNE4Q96A23 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC16.59■□□□□ 0.25
CPNE4Q96A23 AC010240.3-201ENST00000607688 395 ntBASIC16.59■□□□□ 0.25
CPNE4Q96A23 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC16.59■□□□□ 0.25
CPNE4Q96A23 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC16.59■□□□□ 0.25
CPNE4Q96A23 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CPNE4Q96A23 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC16.59■□□□□ 0.25
CPNE4Q96A23 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CPNE4Q96A23 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CPNE4Q96A23 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CPNE4Q96A23 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC16.59■□□□□ 0.25
CPNE4Q96A23 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CPNE4Q96A23 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
CPNE4Q96A23 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
CPNE4Q96A23 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC16.59■□□□□ 0.25
CPNE4Q96A23 ANO7L1-203ENST00000602586 1720 ntBASIC16.59■□□□□ 0.25
CPNE4Q96A23 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC16.59■□□□□ 0.25
CPNE4Q96A23 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CPNE4Q96A23 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
CPNE4Q96A23 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CPNE4Q96A23 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC16.58■□□□□ 0.25
CPNE4Q96A23 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CPNE4Q96A23 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CPNE4Q96A23 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CPNE4Q96A23 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
CPNE4Q96A23 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
CPNE4Q96A23 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
CPNE4Q96A23 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CPNE4Q96A23 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CPNE4Q96A23 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CPNE4Q96A23 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CPNE4Q96A23 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC16.58■□□□□ 0.24
CPNE4Q96A23 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC16.58■□□□□ 0.24
CPNE4Q96A23 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CPNE4Q96A23 MIR3917-201ENST00000580971 93 ntBASIC16.58■□□□□ 0.24
CPNE4Q96A23 NAT14-202ENST00000587400 416 ntTSL 5 BASIC16.58■□□□□ 0.24
CPNE4Q96A23 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC16.58■□□□□ 0.24
CPNE4Q96A23 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CPNE4Q96A23 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC16.58■□□□□ 0.24
CPNE4Q96A23 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CPNE4Q96A23 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CPNE4Q96A23 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC16.58■□□□□ 0.24
CPNE4Q96A23 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CPNE4Q96A23 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
CPNE4Q96A23 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CPNE4Q96A23 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CPNE4Q96A23 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CPNE4Q96A23 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC16.57■□□□□ 0.24
CPNE4Q96A23 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CPNE4Q96A23 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CPNE4Q96A23 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CPNE4Q96A23 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CPNE4Q96A23 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC16.57■□□□□ 0.24
CPNE4Q96A23 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CPNE4Q96A23 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC16.57■□□□□ 0.24
CPNE4Q96A23 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CPNE4Q96A23 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CPNE4Q96A23 KRT8P50-201ENST00000562022 1438 ntBASIC16.57■□□□□ 0.24
CPNE4Q96A23 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CPNE4Q96A23 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CPNE4Q96A23 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
CPNE4Q96A23 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC16.57■□□□□ 0.24
CPNE4Q96A23 AL359075.1-203ENST00000462729 1002 ntBASIC16.57■□□□□ 0.24
CPNE4Q96A23 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CPNE4Q96A23 RMI2-205ENST00000576027 818 ntTSL 2 BASIC16.57■□□□□ 0.24
CPNE4Q96A23 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC16.57■□□□□ 0.24
CPNE4Q96A23 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
CPNE4Q96A23 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC16.57■□□□□ 0.24
CPNE4Q96A23 AC098818.2-201ENST00000564925 2320 ntBASIC16.57■□□□□ 0.24
CPNE4Q96A23 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC16.57■□□□□ 0.24
CPNE4Q96A23 BCL2-203ENST00000589955 5011 ntBASIC16.57■□□□□ 0.24
CPNE4Q96A23 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CPNE4Q96A23 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CPNE4Q96A23 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CPNE4Q96A23 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CPNE4Q96A23 AL031598.1-201ENST00000561511 1773 ntBASIC16.56■□□□□ 0.24
CPNE4Q96A23 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC16.56■□□□□ 0.24
CPNE4Q96A23 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CPNE4Q96A23 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CPNE4Q96A23 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CPNE4Q96A23 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CPNE4Q96A23 MED25-212ENST00000618715 1467 ntTSL 5 BASIC16.56■□□□□ 0.24
CPNE4Q96A23 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
CPNE4Q96A23 AC020763.4-201ENST00000623414 4170 ntBASIC16.56■□□□□ 0.24
CPNE4Q96A23 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms