Protein–RNA interactions for Protein: Q93038

TNFRSF25, Tumor necrosis factor receptor superfamily member 25, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25Q93038 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC20.99■□□□□ 0.95
TNFRSF25Q93038 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC20.99■□□□□ 0.95
TNFRSF25Q93038 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TNFRSF25Q93038 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TNFRSF25Q93038 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TNFRSF25Q93038 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
TNFRSF25Q93038 AL390961.4-201ENST00000623958 2535 ntBASIC20.99■□□□□ 0.95
TNFRSF25Q93038 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC20.98■□□□□ 0.95
TNFRSF25Q93038 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TNFRSF25Q93038 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
TNFRSF25Q93038 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
TNFRSF25Q93038 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TNFRSF25Q93038 ABALON-201ENST00000629058 1903 ntBASIC20.98■□□□□ 0.95
TNFRSF25Q93038 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
TNFRSF25Q93038 PHGDH-209ENST00000641074 1780 ntBASIC20.98■□□□□ 0.95
TNFRSF25Q93038 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TNFRSF25Q93038 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
TNFRSF25Q93038 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TNFRSF25Q93038 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TNFRSF25Q93038 RN7SL850P-201ENST00000579959 291 ntBASIC20.98■□□□□ 0.95
TNFRSF25Q93038 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC20.98■□□□□ 0.95
TNFRSF25Q93038 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TNFRSF25Q93038 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TNFRSF25Q93038 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC20.98■□□□□ 0.95
TNFRSF25Q93038 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TNFRSF25Q93038 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TNFRSF25Q93038 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TNFRSF25Q93038 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TNFRSF25Q93038 GMCL1P1-201ENST00000463439 1581 ntBASIC20.97■□□□□ 0.95
TNFRSF25Q93038 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TNFRSF25Q93038 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TNFRSF25Q93038 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TNFRSF25Q93038 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TNFRSF25Q93038 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
TNFRSF25Q93038 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
TNFRSF25Q93038 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TNFRSF25Q93038 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TNFRSF25Q93038 RASA4DP-201ENST00000460726 1199 ntBASIC20.97■□□□□ 0.95
TNFRSF25Q93038 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TNFRSF25Q93038 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC20.97■□□□□ 0.95
TNFRSF25Q93038 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
TNFRSF25Q93038 AL031432.5-201ENST00000641059 760 ntBASIC20.97■□□□□ 0.95
TNFRSF25Q93038 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
TNFRSF25Q93038 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
TNFRSF25Q93038 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
TNFRSF25Q93038 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TNFRSF25Q93038 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TNFRSF25Q93038 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
TNFRSF25Q93038 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
TNFRSF25Q93038 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TNFRSF25Q93038 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TNFRSF25Q93038 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TNFRSF25Q93038 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.96■□□□□ 0.95
TNFRSF25Q93038 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
TNFRSF25Q93038 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TNFRSF25Q93038 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
TNFRSF25Q93038 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC20.96■□□□□ 0.95
TNFRSF25Q93038 PVRIG2P-201ENST00000435460 978 ntBASIC20.96■□□□□ 0.95
TNFRSF25Q93038 KRT18P38-201ENST00000449496 1282 ntBASIC20.96■□□□□ 0.95
TNFRSF25Q93038 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC20.96■□□□□ 0.95
TNFRSF25Q93038 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC20.96■□□□□ 0.95
TNFRSF25Q93038 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC20.96■□□□□ 0.95
TNFRSF25Q93038 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TNFRSF25Q93038 AC009065.1-201ENST00000564055 1225 ntBASIC20.96■□□□□ 0.95
TNFRSF25Q93038 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
TNFRSF25Q93038 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TNFRSF25Q93038 FLYWCH1P1-201ENST00000460917 1874 ntBASIC20.96■□□□□ 0.95
TNFRSF25Q93038 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TNFRSF25Q93038 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
TNFRSF25Q93038 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TNFRSF25Q93038 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TNFRSF25Q93038 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC20.95■□□□□ 0.94
TNFRSF25Q93038 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC20.95■□□□□ 0.94
TNFRSF25Q93038 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC20.95■□□□□ 0.94
TNFRSF25Q93038 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC20.95■□□□□ 0.94
TNFRSF25Q93038 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TNFRSF25Q93038 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TNFRSF25Q93038 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TNFRSF25Q93038 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
TNFRSF25Q93038 STARP1-201ENST00000397973 869 ntBASIC20.95■□□□□ 0.94
TNFRSF25Q93038 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC20.95■□□□□ 0.94
TNFRSF25Q93038 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TNFRSF25Q93038 AC140113.3-201ENST00000605663 199 ntBASIC20.95■□□□□ 0.94
TNFRSF25Q93038 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC20.95■□□□□ 0.94
TNFRSF25Q93038 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
TNFRSF25Q93038 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
TNFRSF25Q93038 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TNFRSF25Q93038 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC20.95■□□□□ 0.94
TNFRSF25Q93038 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TNFRSF25Q93038 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
TNFRSF25Q93038 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TNFRSF25Q93038 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC20.94■□□□□ 0.94
TNFRSF25Q93038 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TNFRSF25Q93038 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TNFRSF25Q93038 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TNFRSF25Q93038 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
TNFRSF25Q93038 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TNFRSF25Q93038 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC20.94■□□□□ 0.94
TNFRSF25Q93038 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
TNFRSF25Q93038 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms