Protein–RNA interactions for Protein: Q92617

NPIPB3, Nuclear pore complex-interacting protein family member B3, humanhuman

Predictions only

Length 1,050 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3Q92617 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NPIPB3Q92617 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NPIPB3Q92617 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
NPIPB3Q92617 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NPIPB3Q92617 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
NPIPB3Q92617 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
NPIPB3Q92617 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NPIPB3Q92617 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
NPIPB3Q92617 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
NPIPB3Q92617 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC14.6□□□□□ -0.07
NPIPB3Q92617 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
NPIPB3Q92617 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC14.6□□□□□ -0.07
NPIPB3Q92617 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
NPIPB3Q92617 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NPIPB3Q92617 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC14.6□□□□□ -0.07
NPIPB3Q92617 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NPIPB3Q92617 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NPIPB3Q92617 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NPIPB3Q92617 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
NPIPB3Q92617 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
NPIPB3Q92617 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC14.6□□□□□ -0.07
NPIPB3Q92617 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC14.6□□□□□ -0.07
NPIPB3Q92617 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC14.6□□□□□ -0.07
NPIPB3Q92617 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC14.6□□□□□ -0.07
NPIPB3Q92617 AC011298.2-201ENST00000617989 482 ntBASIC14.6□□□□□ -0.07
NPIPB3Q92617 CR392000.1-201ENST00000624770 1228 ntBASIC14.6□□□□□ -0.07
NPIPB3Q92617 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC14.6□□□□□ -0.07
NPIPB3Q92617 ABBA01031674.1-201ENST00000635145 728 ntBASIC14.6□□□□□ -0.07
NPIPB3Q92617 AC073648.6-201ENST00000641589 218 ntBASIC14.6□□□□□ -0.07
NPIPB3Q92617 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
NPIPB3Q92617 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
NPIPB3Q92617 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
NPIPB3Q92617 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC14.6□□□□□ -0.07
NPIPB3Q92617 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
NPIPB3Q92617 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NPIPB3Q92617 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC14.6□□□□□ -0.07
NPIPB3Q92617 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
NPIPB3Q92617 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NPIPB3Q92617 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC14.6□□□□□ -0.07
NPIPB3Q92617 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
NPIPB3Q92617 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC14.6□□□□□ -0.07
NPIPB3Q92617 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
NPIPB3Q92617 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
NPIPB3Q92617 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC14.59□□□□□ -0.07
NPIPB3Q92617 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
NPIPB3Q92617 KRT16P1-201ENST00000399124 1418 ntBASIC14.59□□□□□ -0.07
NPIPB3Q92617 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NPIPB3Q92617 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NPIPB3Q92617 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NPIPB3Q92617 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
NPIPB3Q92617 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NPIPB3Q92617 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
NPIPB3Q92617 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NPIPB3Q92617 FZD10-202ENST00000539839 3282 ntBASIC14.59□□□□□ -0.07
NPIPB3Q92617 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
NPIPB3Q92617 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NPIPB3Q92617 LTB4R2-202ENST00000528054 3092 ntBASIC14.59□□□□□ -0.07
NPIPB3Q92617 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NPIPB3Q92617 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NPIPB3Q92617 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
NPIPB3Q92617 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NPIPB3Q92617 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NPIPB3Q92617 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
NPIPB3Q92617 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NPIPB3Q92617 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NPIPB3Q92617 AL353807.1-201ENST00000427475 662 ntBASIC14.59□□□□□ -0.07
NPIPB3Q92617 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
NPIPB3Q92617 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC14.59□□□□□ -0.07
NPIPB3Q92617 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
NPIPB3Q92617 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC14.59□□□□□ -0.07
NPIPB3Q92617 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC14.59□□□□□ -0.07
NPIPB3Q92617 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC14.59□□□□□ -0.07
NPIPB3Q92617 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC14.59□□□□□ -0.07
NPIPB3Q92617 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NPIPB3Q92617 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC14.59□□□□□ -0.07
NPIPB3Q92617 AC006058.3-201ENST00000606217 1069 ntBASIC14.59□□□□□ -0.07
NPIPB3Q92617 AL031985.4-201ENST00000642138 673 ntBASIC14.59□□□□□ -0.07
NPIPB3Q92617 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
NPIPB3Q92617 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NPIPB3Q92617 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NPIPB3Q92617 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NPIPB3Q92617 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
NPIPB3Q92617 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
NPIPB3Q92617 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC14.59□□□□□ -0.07
NPIPB3Q92617 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NPIPB3Q92617 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC14.59□□□□□ -0.07
NPIPB3Q92617 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC14.59□□□□□ -0.07
NPIPB3Q92617 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC14.59□□□□□ -0.07
NPIPB3Q92617 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NPIPB3Q92617 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
NPIPB3Q92617 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
NPIPB3Q92617 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
NPIPB3Q92617 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC14.59□□□□□ -0.07
NPIPB3Q92617 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC14.59□□□□□ -0.07
NPIPB3Q92617 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NPIPB3Q92617 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
NPIPB3Q92617 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC14.58□□□□□ -0.07
NPIPB3Q92617 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
NPIPB3Q92617 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
NPIPB3Q92617 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms