Protein–RNA interactions for Protein: Q8WXD2

SCG3, Secretogranin-3, humanhuman

Known RBP Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3Q8WXD2 Z98044.1-201ENST00000632503 1764 ntBASIC18.93■□□□□ 0.62
SCG3Q8WXD2 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SCG3Q8WXD2 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SCG3Q8WXD2 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SCG3Q8WXD2 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC18.93■□□□□ 0.62
SCG3Q8WXD2 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
SCG3Q8WXD2 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SCG3Q8WXD2 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.93■□□□□ 0.62
SCG3Q8WXD2 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SCG3Q8WXD2 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SCG3Q8WXD2 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.93■□□□□ 0.62
SCG3Q8WXD2 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.93■□□□□ 0.62
SCG3Q8WXD2 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC18.93■□□□□ 0.62
SCG3Q8WXD2 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18.93■□□□□ 0.62
SCG3Q8WXD2 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SCG3Q8WXD2 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC18.93■□□□□ 0.62
SCG3Q8WXD2 HIST1H2APS4-201ENST00000362070 348 ntBASIC18.93■□□□□ 0.62
SCG3Q8WXD2 SLC25A1P2-201ENST00000430693 912 ntBASIC18.93■□□□□ 0.62
SCG3Q8WXD2 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.93■□□□□ 0.62
SCG3Q8WXD2 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC18.93■□□□□ 0.62
SCG3Q8WXD2 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
SCG3Q8WXD2 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC18.93■□□□□ 0.62
SCG3Q8WXD2 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
SCG3Q8WXD2 GPX4-207ENST00000589115 812 ntTSL 2 BASIC18.93■□□□□ 0.62
SCG3Q8WXD2 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC18.93■□□□□ 0.62
SCG3Q8WXD2 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC18.93■□□□□ 0.62
SCG3Q8WXD2 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SCG3Q8WXD2 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.93■□□□□ 0.62
SCG3Q8WXD2 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SCG3Q8WXD2 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.93■□□□□ 0.62
SCG3Q8WXD2 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SCG3Q8WXD2 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC18.93■□□□□ 0.62
SCG3Q8WXD2 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SCG3Q8WXD2 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SCG3Q8WXD2 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SCG3Q8WXD2 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC18.93■□□□□ 0.62
SCG3Q8WXD2 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
SCG3Q8WXD2 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.93■□□□□ 0.62
SCG3Q8WXD2 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC18.92■□□□□ 0.62
SCG3Q8WXD2 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
SCG3Q8WXD2 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SCG3Q8WXD2 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
SCG3Q8WXD2 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SCG3Q8WXD2 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC18.92■□□□□ 0.62
SCG3Q8WXD2 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SCG3Q8WXD2 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SCG3Q8WXD2 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SCG3Q8WXD2 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC18.92■□□□□ 0.62
SCG3Q8WXD2 AL031598.1-201ENST00000561511 1773 ntBASIC18.92■□□□□ 0.62
SCG3Q8WXD2 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SCG3Q8WXD2 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SCG3Q8WXD2 AC091390.4-202ENST00000476426 537 ntBASIC18.92■□□□□ 0.62
SCG3Q8WXD2 FDX2-206ENST00000492239 773 ntTSL 2 BASIC18.92■□□□□ 0.62
SCG3Q8WXD2 KRT18P35-201ENST00000510488 1269 ntBASIC18.92■□□□□ 0.62
SCG3Q8WXD2 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
SCG3Q8WXD2 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC18.92■□□□□ 0.62
SCG3Q8WXD2 CFL2-205ENST00000555765 632 ntTSL 2 BASIC18.92■□□□□ 0.62
SCG3Q8WXD2 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SCG3Q8WXD2 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
SCG3Q8WXD2 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
SCG3Q8WXD2 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.92■□□□□ 0.62
SCG3Q8WXD2 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SCG3Q8WXD2 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC18.92■□□□□ 0.62
SCG3Q8WXD2 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.92■□□□□ 0.62
SCG3Q8WXD2 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SCG3Q8WXD2 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC18.92■□□□□ 0.62
SCG3Q8WXD2 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC18.92■□□□□ 0.62
SCG3Q8WXD2 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SCG3Q8WXD2 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SCG3Q8WXD2 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.92■□□□□ 0.62
SCG3Q8WXD2 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SCG3Q8WXD2 AC073508.3-201ENST00000619697 1419 ntBASIC18.91■□□□□ 0.62
SCG3Q8WXD2 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SCG3Q8WXD2 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SCG3Q8WXD2 HTR7P1-202ENST00000624664 4411 ntBASIC18.91■□□□□ 0.62
SCG3Q8WXD2 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SCG3Q8WXD2 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SCG3Q8WXD2 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.91■□□□□ 0.62
SCG3Q8WXD2 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SCG3Q8WXD2 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SCG3Q8WXD2 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SCG3Q8WXD2 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SCG3Q8WXD2 PRR31-201ENST00000371629 978 ntTSL 2 BASIC18.91■□□□□ 0.62
SCG3Q8WXD2 NME3-204ENST00000563498 920 ntTSL 2 BASIC18.91■□□□□ 0.62
SCG3Q8WXD2 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC18.91■□□□□ 0.62
SCG3Q8WXD2 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC18.91■□□□□ 0.62
SCG3Q8WXD2 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
SCG3Q8WXD2 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
SCG3Q8WXD2 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SCG3Q8WXD2 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SCG3Q8WXD2 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SCG3Q8WXD2 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SCG3Q8WXD2 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
SCG3Q8WXD2 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
SCG3Q8WXD2 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC18.91■□□□□ 0.62
SCG3Q8WXD2 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SCG3Q8WXD2 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.91■□□□□ 0.62
SCG3Q8WXD2 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SCG3Q8WXD2 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
SCG3Q8WXD2 LGALS8-AS1-201ENST00000487567 1457 ntBASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms