Protein–RNA interactions for Protein: Q8TBE3

FNDC9, Fibronectin type III domain-containing protein 9, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC9Q8TBE3 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC16.64■□□□□ 0.25
FNDC9Q8TBE3 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
FNDC9Q8TBE3 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
FNDC9Q8TBE3 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
FNDC9Q8TBE3 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
FNDC9Q8TBE3 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC16.64■□□□□ 0.25
FNDC9Q8TBE3 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC16.64■□□□□ 0.25
FNDC9Q8TBE3 AL031133.1-201ENST00000406807 723 ntBASIC16.64■□□□□ 0.25
FNDC9Q8TBE3 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
FNDC9Q8TBE3 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
FNDC9Q8TBE3 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
FNDC9Q8TBE3 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
FNDC9Q8TBE3 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
FNDC9Q8TBE3 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
FNDC9Q8TBE3 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC16.64■□□□□ 0.25
FNDC9Q8TBE3 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
FNDC9Q8TBE3 AL671277.2-201ENST00000458060 996 ntBASIC16.64■□□□□ 0.25
FNDC9Q8TBE3 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
FNDC9Q8TBE3 SEC1P-202ENST00000473944 940 ntBASIC16.64■□□□□ 0.25
FNDC9Q8TBE3 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC16.64■□□□□ 0.25
FNDC9Q8TBE3 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC16.64■□□□□ 0.25
FNDC9Q8TBE3 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC16.64■□□□□ 0.25
FNDC9Q8TBE3 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC16.64■□□□□ 0.25
FNDC9Q8TBE3 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
FNDC9Q8TBE3 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC16.64■□□□□ 0.25
FNDC9Q8TBE3 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
FNDC9Q8TBE3 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.64■□□□□ 0.25
FNDC9Q8TBE3 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
FNDC9Q8TBE3 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC16.64■□□□□ 0.25
FNDC9Q8TBE3 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
FNDC9Q8TBE3 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
FNDC9Q8TBE3 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC16.64■□□□□ 0.25
FNDC9Q8TBE3 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC16.64■□□□□ 0.25
FNDC9Q8TBE3 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC16.64■□□□□ 0.25
FNDC9Q8TBE3 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
FNDC9Q8TBE3 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
FNDC9Q8TBE3 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
FNDC9Q8TBE3 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
FNDC9Q8TBE3 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
FNDC9Q8TBE3 AC034236.2-201ENST00000606662 1610 ntBASIC16.63■□□□□ 0.25
FNDC9Q8TBE3 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
FNDC9Q8TBE3 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
FNDC9Q8TBE3 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC16.63■□□□□ 0.25
FNDC9Q8TBE3 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
FNDC9Q8TBE3 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC16.63■□□□□ 0.25
FNDC9Q8TBE3 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
FNDC9Q8TBE3 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC16.63■□□□□ 0.25
FNDC9Q8TBE3 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
FNDC9Q8TBE3 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
FNDC9Q8TBE3 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC16.63■□□□□ 0.25
FNDC9Q8TBE3 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC16.63■□□□□ 0.25
FNDC9Q8TBE3 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC16.63■□□□□ 0.25
FNDC9Q8TBE3 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC16.63■□□□□ 0.25
FNDC9Q8TBE3 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
FNDC9Q8TBE3 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
FNDC9Q8TBE3 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC16.63■□□□□ 0.25
FNDC9Q8TBE3 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
FNDC9Q8TBE3 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
FNDC9Q8TBE3 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
FNDC9Q8TBE3 AC034232.1-201ENST00000506026 1064 ntBASIC16.63■□□□□ 0.25
FNDC9Q8TBE3 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
FNDC9Q8TBE3 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC16.63■□□□□ 0.25
FNDC9Q8TBE3 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC16.63■□□□□ 0.25
FNDC9Q8TBE3 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC16.63■□□□□ 0.25
FNDC9Q8TBE3 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC16.63■□□□□ 0.25
FNDC9Q8TBE3 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
FNDC9Q8TBE3 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
FNDC9Q8TBE3 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
FNDC9Q8TBE3 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
FNDC9Q8TBE3 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
FNDC9Q8TBE3 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
FNDC9Q8TBE3 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
FNDC9Q8TBE3 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC16.63■□□□□ 0.25
FNDC9Q8TBE3 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC16.63■□□□□ 0.25
FNDC9Q8TBE3 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
FNDC9Q8TBE3 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC16.63■□□□□ 0.25
FNDC9Q8TBE3 AL357033.4-201ENST00000617703 1807 ntBASIC16.63■□□□□ 0.25
FNDC9Q8TBE3 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
FNDC9Q8TBE3 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
FNDC9Q8TBE3 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
FNDC9Q8TBE3 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC16.62■□□□□ 0.25
FNDC9Q8TBE3 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
FNDC9Q8TBE3 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.62■□□□□ 0.25
FNDC9Q8TBE3 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
FNDC9Q8TBE3 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
FNDC9Q8TBE3 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC16.62■□□□□ 0.25
FNDC9Q8TBE3 AC006333.2-201ENST00000607957 2099 ntBASIC16.62■□□□□ 0.25
FNDC9Q8TBE3 MTMR9LP-203ENST00000426597 1545 ntBASIC16.62■□□□□ 0.25
FNDC9Q8TBE3 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
FNDC9Q8TBE3 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
FNDC9Q8TBE3 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
FNDC9Q8TBE3 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
FNDC9Q8TBE3 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
FNDC9Q8TBE3 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC16.62■□□□□ 0.25
FNDC9Q8TBE3 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC16.62■□□□□ 0.25
FNDC9Q8TBE3 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC16.62■□□□□ 0.25
FNDC9Q8TBE3 AC112907.2-201ENST00000448639 330 ntBASIC16.62■□□□□ 0.25
FNDC9Q8TBE3 RASA4DP-201ENST00000460726 1199 ntBASIC16.62■□□□□ 0.25
FNDC9Q8TBE3 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
FNDC9Q8TBE3 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms