Protein–RNA interactions for Protein: Q8TBC4

UBA3, NEDD8-activating enzyme E1 catalytic subunit, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3Q8TBC4 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
UBA3Q8TBC4 AL163051.1-201ENST00000569214 1512 ntBASIC19.56■□□□□ 0.72
UBA3Q8TBC4 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
UBA3Q8TBC4 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
UBA3Q8TBC4 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
UBA3Q8TBC4 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
UBA3Q8TBC4 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
UBA3Q8TBC4 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
UBA3Q8TBC4 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
UBA3Q8TBC4 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
UBA3Q8TBC4 RNF152P1-201ENST00000397754 604 ntBASIC19.56■□□□□ 0.72
UBA3Q8TBC4 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC19.56■□□□□ 0.72
UBA3Q8TBC4 TSPY5P-201ENST00000426936 936 ntBASIC19.56■□□□□ 0.72
UBA3Q8TBC4 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
UBA3Q8TBC4 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC19.56■□□□□ 0.72
UBA3Q8TBC4 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC19.56■□□□□ 0.72
UBA3Q8TBC4 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
UBA3Q8TBC4 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
UBA3Q8TBC4 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.56■□□□□ 0.72
UBA3Q8TBC4 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.56■□□□□ 0.72
UBA3Q8TBC4 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
UBA3Q8TBC4 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC19.56■□□□□ 0.72
UBA3Q8TBC4 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
UBA3Q8TBC4 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
UBA3Q8TBC4 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC19.56■□□□□ 0.72
UBA3Q8TBC4 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC19.56■□□□□ 0.72
UBA3Q8TBC4 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
UBA3Q8TBC4 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
UBA3Q8TBC4 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
UBA3Q8TBC4 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
UBA3Q8TBC4 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
UBA3Q8TBC4 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
UBA3Q8TBC4 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
UBA3Q8TBC4 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC19.55■□□□□ 0.72
UBA3Q8TBC4 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
UBA3Q8TBC4 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.55■□□□□ 0.72
UBA3Q8TBC4 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
UBA3Q8TBC4 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
UBA3Q8TBC4 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
UBA3Q8TBC4 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
UBA3Q8TBC4 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC19.55■□□□□ 0.72
UBA3Q8TBC4 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC19.55■□□□□ 0.72
UBA3Q8TBC4 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC19.55■□□□□ 0.72
UBA3Q8TBC4 DUX4L26-201ENST00000489078 1255 ntBASIC19.55■□□□□ 0.72
UBA3Q8TBC4 CD81-212ENST00000526072 1172 ntTSL 5 BASIC19.55■□□□□ 0.72
UBA3Q8TBC4 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC19.55■□□□□ 0.72
UBA3Q8TBC4 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.55■□□□□ 0.72
UBA3Q8TBC4 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
UBA3Q8TBC4 AL157888.1-201ENST00000631930 593 ntBASIC19.55■□□□□ 0.72
UBA3Q8TBC4 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC19.55■□□□□ 0.72
UBA3Q8TBC4 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
UBA3Q8TBC4 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
UBA3Q8TBC4 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
UBA3Q8TBC4 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
UBA3Q8TBC4 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
UBA3Q8TBC4 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
UBA3Q8TBC4 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
UBA3Q8TBC4 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
UBA3Q8TBC4 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
UBA3Q8TBC4 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC19.54■□□□□ 0.72
UBA3Q8TBC4 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC19.54■□□□□ 0.72
UBA3Q8TBC4 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
UBA3Q8TBC4 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.54■□□□□ 0.72
UBA3Q8TBC4 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
UBA3Q8TBC4 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
UBA3Q8TBC4 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
UBA3Q8TBC4 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
UBA3Q8TBC4 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
UBA3Q8TBC4 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC19.54■□□□□ 0.72
UBA3Q8TBC4 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC19.54■□□□□ 0.72
UBA3Q8TBC4 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC19.54■□□□□ 0.72
UBA3Q8TBC4 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
UBA3Q8TBC4 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
UBA3Q8TBC4 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC19.54■□□□□ 0.72
UBA3Q8TBC4 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
UBA3Q8TBC4 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
UBA3Q8TBC4 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
UBA3Q8TBC4 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
UBA3Q8TBC4 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
UBA3Q8TBC4 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
UBA3Q8TBC4 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
UBA3Q8TBC4 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
UBA3Q8TBC4 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
UBA3Q8TBC4 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC19.54■□□□□ 0.72
UBA3Q8TBC4 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
UBA3Q8TBC4 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC19.53■□□□□ 0.72
UBA3Q8TBC4 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
UBA3Q8TBC4 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
UBA3Q8TBC4 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
UBA3Q8TBC4 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
UBA3Q8TBC4 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
UBA3Q8TBC4 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
UBA3Q8TBC4 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
UBA3Q8TBC4 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
UBA3Q8TBC4 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
UBA3Q8TBC4 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC19.53■□□□□ 0.72
UBA3Q8TBC4 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
UBA3Q8TBC4 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.53■□□□□ 0.72
UBA3Q8TBC4 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC19.53■□□□□ 0.72
UBA3Q8TBC4 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms