Protein–RNA interactions for Protein: Q8N684

CPSF7, Cleavage and polyadenylation specificity factor subunit 7, humanhuman

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7Q8N684 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.49
CPSF7Q8N684 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC18.08■□□□□ 0.49
CPSF7Q8N684 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CPSF7Q8N684 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.49
CPSF7Q8N684 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CPSF7Q8N684 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.08■□□□□ 0.49
CPSF7Q8N684 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CPSF7Q8N684 KATNBL1P6-202ENST00000562413 1466 ntBASIC18.08■□□□□ 0.49
CPSF7Q8N684 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
CPSF7Q8N684 AC112777.1-201ENST00000540175 1423 ntBASIC18.08■□□□□ 0.49
CPSF7Q8N684 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
CPSF7Q8N684 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.08■□□□□ 0.49
CPSF7Q8N684 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
CPSF7Q8N684 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CPSF7Q8N684 SAPCD2P4-201ENST00000424595 1171 ntBASIC18.08■□□□□ 0.48
CPSF7Q8N684 ECEL1P3-201ENST00000427961 737 ntBASIC18.08■□□□□ 0.48
CPSF7Q8N684 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC18.08■□□□□ 0.48
CPSF7Q8N684 TSPY15P-201ENST00000457163 923 ntBASIC18.08■□□□□ 0.48
CPSF7Q8N684 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CPSF7Q8N684 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC18.08■□□□□ 0.48
CPSF7Q8N684 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC18.08■□□□□ 0.48
CPSF7Q8N684 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC18.08■□□□□ 0.48
CPSF7Q8N684 RPS15-203ENST00000586096 570 ntTSL 2 BASIC18.08■□□□□ 0.48
CPSF7Q8N684 HLA-A-209ENST00000638375 975 ntBASIC18.08■□□□□ 0.48
CPSF7Q8N684 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC18.08■□□□□ 0.48
CPSF7Q8N684 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CPSF7Q8N684 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CPSF7Q8N684 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
CPSF7Q8N684 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
CPSF7Q8N684 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CPSF7Q8N684 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.48
CPSF7Q8N684 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CPSF7Q8N684 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC18.08■□□□□ 0.48
CPSF7Q8N684 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.48
CPSF7Q8N684 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CPSF7Q8N684 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CPSF7Q8N684 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
CPSF7Q8N684 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC18.07■□□□□ 0.48
CPSF7Q8N684 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CPSF7Q8N684 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CPSF7Q8N684 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CPSF7Q8N684 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CPSF7Q8N684 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CPSF7Q8N684 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC18.07■□□□□ 0.48
CPSF7Q8N684 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC18.07■□□□□ 0.48
CPSF7Q8N684 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC18.07■□□□□ 0.48
CPSF7Q8N684 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC18.07■□□□□ 0.48
CPSF7Q8N684 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CPSF7Q8N684 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CPSF7Q8N684 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.07■□□□□ 0.48
CPSF7Q8N684 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC18.07■□□□□ 0.48
CPSF7Q8N684 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
CPSF7Q8N684 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC18.07■□□□□ 0.48
CPSF7Q8N684 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC18.07■□□□□ 0.48
CPSF7Q8N684 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CPSF7Q8N684 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CPSF7Q8N684 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CPSF7Q8N684 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CPSF7Q8N684 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CPSF7Q8N684 KRT8P32-201ENST00000512863 1461 ntBASIC18.07■□□□□ 0.48
CPSF7Q8N684 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CPSF7Q8N684 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CPSF7Q8N684 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
CPSF7Q8N684 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CPSF7Q8N684 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.06■□□□□ 0.48
CPSF7Q8N684 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC18.06■□□□□ 0.48
CPSF7Q8N684 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
CPSF7Q8N684 FST-202ENST00000396947 2538 ntTSL 5 BASIC18.06■□□□□ 0.48
CPSF7Q8N684 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CPSF7Q8N684 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CPSF7Q8N684 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CPSF7Q8N684 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC18.06■□□□□ 0.48
CPSF7Q8N684 GNE-204ENST00000539208 2190 ntTSL 2 BASIC18.06■□□□□ 0.48
CPSF7Q8N684 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CPSF7Q8N684 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CPSF7Q8N684 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CPSF7Q8N684 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
CPSF7Q8N684 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC18.06■□□□□ 0.48
CPSF7Q8N684 AC211429.1-201ENST00000415277 523 ntBASIC18.06■□□□□ 0.48
CPSF7Q8N684 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC18.06■□□□□ 0.48
CPSF7Q8N684 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CPSF7Q8N684 AL355075.4-201ENST00000554988 638 ntBASIC18.06■□□□□ 0.48
CPSF7Q8N684 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC18.06■□□□□ 0.48
CPSF7Q8N684 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CPSF7Q8N684 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CPSF7Q8N684 KRT8P41-201ENST00000533985 1514 ntBASIC18.06■□□□□ 0.48
CPSF7Q8N684 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
CPSF7Q8N684 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CPSF7Q8N684 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CPSF7Q8N684 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.06■□□□□ 0.48
CPSF7Q8N684 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CPSF7Q8N684 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.06■□□□□ 0.48
CPSF7Q8N684 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CPSF7Q8N684 KRT8P45-201ENST00000414328 1447 ntBASIC18.06■□□□□ 0.48
CPSF7Q8N684 PRORSD1P-202ENST00000563365 2154 ntBASIC18.06■□□□□ 0.48
CPSF7Q8N684 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CPSF7Q8N684 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
CPSF7Q8N684 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.05■□□□□ 0.48
CPSF7Q8N684 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.05■□□□□ 0.48
CPSF7Q8N684 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms