Protein–RNA interactions for Protein: Q8N257

HIST3H2BB, Histone H2B type 3-B, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H2BBQ8N257 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HIST3H2BBQ8N257 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HIST3H2BBQ8N257 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
HIST3H2BBQ8N257 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
HIST3H2BBQ8N257 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
HIST3H2BBQ8N257 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC13.8□□□□□ -0.2
HIST3H2BBQ8N257 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HIST3H2BBQ8N257 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC13.8□□□□□ -0.2
HIST3H2BBQ8N257 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
HIST3H2BBQ8N257 AC053503.5-201ENST00000601508 636 ntBASIC13.8□□□□□ -0.2
HIST3H2BBQ8N257 FAM21FP-204ENST00000608637 956 ntBASIC13.8□□□□□ -0.2
HIST3H2BBQ8N257 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
HIST3H2BBQ8N257 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
HIST3H2BBQ8N257 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
HIST3H2BBQ8N257 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC13.8□□□□□ -0.2
HIST3H2BBQ8N257 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
HIST3H2BBQ8N257 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HIST3H2BBQ8N257 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
HIST3H2BBQ8N257 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
HIST3H2BBQ8N257 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC13.8□□□□□ -0.2
HIST3H2BBQ8N257 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC13.8□□□□□ -0.2
HIST3H2BBQ8N257 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
HIST3H2BBQ8N257 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HIST3H2BBQ8N257 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HIST3H2BBQ8N257 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC13.8□□□□□ -0.2
HIST3H2BBQ8N257 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
HIST3H2BBQ8N257 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
HIST3H2BBQ8N257 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC13.8□□□□□ -0.2
HIST3H2BBQ8N257 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HIST3H2BBQ8N257 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
HIST3H2BBQ8N257 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC13.79□□□□□ -0.2
HIST3H2BBQ8N257 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC13.79□□□□□ -0.2
HIST3H2BBQ8N257 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC13.79□□□□□ -0.2
HIST3H2BBQ8N257 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC13.79□□□□□ -0.2
HIST3H2BBQ8N257 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HIST3H2BBQ8N257 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC13.79□□□□□ -0.2
HIST3H2BBQ8N257 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HIST3H2BBQ8N257 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HIST3H2BBQ8N257 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HIST3H2BBQ8N257 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
HIST3H2BBQ8N257 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
HIST3H2BBQ8N257 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC13.79□□□□□ -0.2
HIST3H2BBQ8N257 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
HIST3H2BBQ8N257 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HIST3H2BBQ8N257 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC13.79□□□□□ -0.2
HIST3H2BBQ8N257 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC13.79□□□□□ -0.2
HIST3H2BBQ8N257 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HIST3H2BBQ8N257 EEF1DP3-203ENST00000566025 782 ntBASIC13.79□□□□□ -0.2
HIST3H2BBQ8N257 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC13.79□□□□□ -0.2
HIST3H2BBQ8N257 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC13.79□□□□□ -0.2
HIST3H2BBQ8N257 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC13.79□□□□□ -0.2
HIST3H2BBQ8N257 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HIST3H2BBQ8N257 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HIST3H2BBQ8N257 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
HIST3H2BBQ8N257 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
HIST3H2BBQ8N257 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
HIST3H2BBQ8N257 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HIST3H2BBQ8N257 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
HIST3H2BBQ8N257 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HIST3H2BBQ8N257 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
HIST3H2BBQ8N257 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HIST3H2BBQ8N257 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
HIST3H2BBQ8N257 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
HIST3H2BBQ8N257 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
HIST3H2BBQ8N257 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
HIST3H2BBQ8N257 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC13.78□□□□□ -0.2
HIST3H2BBQ8N257 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
HIST3H2BBQ8N257 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
HIST3H2BBQ8N257 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HIST3H2BBQ8N257 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
HIST3H2BBQ8N257 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
HIST3H2BBQ8N257 PAUPAR-201ENST00000630360 2965 ntBASIC13.78□□□□□ -0.2
HIST3H2BBQ8N257 SDHAP1-207ENST00000440850 2000 ntBASIC13.78□□□□□ -0.2
HIST3H2BBQ8N257 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HIST3H2BBQ8N257 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
HIST3H2BBQ8N257 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HIST3H2BBQ8N257 AC006449.5-201ENST00000610658 2098 ntBASIC13.78□□□□□ -0.2
HIST3H2BBQ8N257 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HIST3H2BBQ8N257 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
HIST3H2BBQ8N257 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HIST3H2BBQ8N257 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC13.78□□□□□ -0.2
HIST3H2BBQ8N257 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HIST3H2BBQ8N257 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
HIST3H2BBQ8N257 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC13.78□□□□□ -0.2
HIST3H2BBQ8N257 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC13.78□□□□□ -0.2
HIST3H2BBQ8N257 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC13.78□□□□□ -0.2
HIST3H2BBQ8N257 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC13.78□□□□□ -0.2
HIST3H2BBQ8N257 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
HIST3H2BBQ8N257 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HIST3H2BBQ8N257 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC13.78□□□□□ -0.2
HIST3H2BBQ8N257 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HIST3H2BBQ8N257 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
HIST3H2BBQ8N257 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC13.78□□□□□ -0.2
HIST3H2BBQ8N257 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
HIST3H2BBQ8N257 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
HIST3H2BBQ8N257 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
HIST3H2BBQ8N257 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HIST3H2BBQ8N257 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
HIST3H2BBQ8N257 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HIST3H2BBQ8N257 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms