Protein–RNA interactions for Protein: Q8IWF9

CCDC83, Coiled-coil domain-containing protein 83, humanhuman

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC83Q8IWF9 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
CCDC83Q8IWF9 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC21.73■■□□□ 1.07
CCDC83Q8IWF9 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC21.73■■□□□ 1.07
CCDC83Q8IWF9 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC21.73■■□□□ 1.07
CCDC83Q8IWF9 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC21.73■■□□□ 1.07
CCDC83Q8IWF9 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC83Q8IWF9 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC21.73■■□□□ 1.07
CCDC83Q8IWF9 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC21.73■■□□□ 1.07
CCDC83Q8IWF9 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC83Q8IWF9 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC83Q8IWF9 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC83Q8IWF9 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC83Q8IWF9 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC83Q8IWF9 KRT8P50-201ENST00000562022 1438 ntBASIC21.72■■□□□ 1.07
CCDC83Q8IWF9 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC83Q8IWF9 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
CCDC83Q8IWF9 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC83Q8IWF9 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC83Q8IWF9 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
CCDC83Q8IWF9 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
CCDC83Q8IWF9 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC83Q8IWF9 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC83Q8IWF9 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC83Q8IWF9 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC21.72■■□□□ 1.07
CCDC83Q8IWF9 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC21.72■■□□□ 1.07
CCDC83Q8IWF9 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC21.72■■□□□ 1.07
CCDC83Q8IWF9 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
CCDC83Q8IWF9 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC21.72■■□□□ 1.07
CCDC83Q8IWF9 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC83Q8IWF9 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC83Q8IWF9 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC83Q8IWF9 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC83Q8IWF9 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC83Q8IWF9 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC83Q8IWF9 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
CCDC83Q8IWF9 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC21.72■■□□□ 1.07
CCDC83Q8IWF9 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC83Q8IWF9 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC83Q8IWF9 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
CCDC83Q8IWF9 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC83Q8IWF9 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC83Q8IWF9 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC83Q8IWF9 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC83Q8IWF9 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC83Q8IWF9 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC21.71■■□□□ 1.07
CCDC83Q8IWF9 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC83Q8IWF9 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC83Q8IWF9 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC83Q8IWF9 PRR31-201ENST00000371629 978 ntTSL 2 BASIC21.71■■□□□ 1.07
CCDC83Q8IWF9 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC83Q8IWF9 AP003071.4-201ENST00000562276 1284 ntBASIC21.71■■□□□ 1.07
CCDC83Q8IWF9 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC83Q8IWF9 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC83Q8IWF9 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC83Q8IWF9 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC83Q8IWF9 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC83Q8IWF9 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC83Q8IWF9 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC21.71■■□□□ 1.07
CCDC83Q8IWF9 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC83Q8IWF9 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC21.7■■□□□ 1.07
CCDC83Q8IWF9 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC21.7■■□□□ 1.06
CCDC83Q8IWF9 AC036111.1-201ENST00000533973 1582 ntBASIC21.7■■□□□ 1.06
CCDC83Q8IWF9 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC21.7■■□□□ 1.06
CCDC83Q8IWF9 AC008764.6-201ENST00000595909 2069 ntBASIC21.7■■□□□ 1.06
CCDC83Q8IWF9 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC21.7■■□□□ 1.06
CCDC83Q8IWF9 AC034236.2-201ENST00000606662 1610 ntBASIC21.7■■□□□ 1.06
CCDC83Q8IWF9 REXO1L9P-201ENST00000604264 2108 ntBASIC21.7■■□□□ 1.06
CCDC83Q8IWF9 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC21.7■■□□□ 1.06
CCDC83Q8IWF9 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
CCDC83Q8IWF9 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC83Q8IWF9 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
CCDC83Q8IWF9 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC83Q8IWF9 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
CCDC83Q8IWF9 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC83Q8IWF9 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC21.7■■□□□ 1.06
CCDC83Q8IWF9 CA15P1-201ENST00000481698 905 ntBASIC21.7■■□□□ 1.06
CCDC83Q8IWF9 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC83Q8IWF9 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC21.7■■□□□ 1.06
CCDC83Q8IWF9 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC21.7■■□□□ 1.06
CCDC83Q8IWF9 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC21.7■■□□□ 1.06
CCDC83Q8IWF9 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
CCDC83Q8IWF9 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC21.7■■□□□ 1.06
CCDC83Q8IWF9 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC83Q8IWF9 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC83Q8IWF9 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC83Q8IWF9 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC83Q8IWF9 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
CCDC83Q8IWF9 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC21.7■■□□□ 1.06
CCDC83Q8IWF9 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
CCDC83Q8IWF9 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC83Q8IWF9 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
CCDC83Q8IWF9 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC21.7■■□□□ 1.06
CCDC83Q8IWF9 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC21.7■■□□□ 1.06
CCDC83Q8IWF9 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC83Q8IWF9 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC83Q8IWF9 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC83Q8IWF9 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC83Q8IWF9 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC83Q8IWF9 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
CCDC83Q8IWF9 POR-209ENST00000439269 1858 ntTSL 2 BASIC21.69■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms