Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC20.51■□□□□ 0.87
CCDC60Q8IWA6 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC60Q8IWA6 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC60Q8IWA6 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC60Q8IWA6 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC60Q8IWA6 AL031598.1-201ENST00000561511 1773 ntBASIC20.5■□□□□ 0.87
CCDC60Q8IWA6 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC60Q8IWA6 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC60Q8IWA6 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC20.5■□□□□ 0.87
CCDC60Q8IWA6 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC20.5■□□□□ 0.87
CCDC60Q8IWA6 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC60Q8IWA6 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC60Q8IWA6 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC20.5■□□□□ 0.87
CCDC60Q8IWA6 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC20.5■□□□□ 0.87
CCDC60Q8IWA6 AC012313.10-201ENST00000623509 926 ntBASIC20.5■□□□□ 0.87
CCDC60Q8IWA6 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC20.5■□□□□ 0.87
CCDC60Q8IWA6 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC20.5■□□□□ 0.87
CCDC60Q8IWA6 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC60Q8IWA6 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC60Q8IWA6 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC60Q8IWA6 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC60Q8IWA6 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
CCDC60Q8IWA6 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC60Q8IWA6 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC20.5■□□□□ 0.87
CCDC60Q8IWA6 KRT89P-201ENST00000620027 1478 ntBASIC20.5■□□□□ 0.87
CCDC60Q8IWA6 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC20.49■□□□□ 0.87
CCDC60Q8IWA6 CROCCP3-202ENST00000420820 1947 ntBASIC20.49■□□□□ 0.87
CCDC60Q8IWA6 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
CCDC60Q8IWA6 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.49■□□□□ 0.87
CCDC60Q8IWA6 ADK-206ENST00000541550 2222 ntTSL 2 BASIC20.49■□□□□ 0.87
CCDC60Q8IWA6 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC20.49■□□□□ 0.87
CCDC60Q8IWA6 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC60Q8IWA6 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC20.49■□□□□ 0.87
CCDC60Q8IWA6 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC60Q8IWA6 AC092329.2-201ENST00000598402 547 ntBASIC20.49■□□□□ 0.87
CCDC60Q8IWA6 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC60Q8IWA6 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
CCDC60Q8IWA6 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC60Q8IWA6 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC60Q8IWA6 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC60Q8IWA6 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC60Q8IWA6 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
CCDC60Q8IWA6 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC60Q8IWA6 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC60Q8IWA6 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC20.49■□□□□ 0.87
CCDC60Q8IWA6 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC60Q8IWA6 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC60Q8IWA6 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC60Q8IWA6 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC20.48■□□□□ 0.87
CCDC60Q8IWA6 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC60Q8IWA6 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC60Q8IWA6 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC60Q8IWA6 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC60Q8IWA6 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC60Q8IWA6 AP000974.1-201ENST00000623909 2387 ntBASIC20.48■□□□□ 0.87
CCDC60Q8IWA6 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
CCDC60Q8IWA6 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC60Q8IWA6 IPPK-202ENST00000375522 882 ntTSL 3 BASIC20.48■□□□□ 0.87
CCDC60Q8IWA6 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC20.48■□□□□ 0.87
CCDC60Q8IWA6 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC20.48■□□□□ 0.87
CCDC60Q8IWA6 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC20.48■□□□□ 0.87
CCDC60Q8IWA6 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC20.48■□□□□ 0.87
CCDC60Q8IWA6 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
CCDC60Q8IWA6 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
CCDC60Q8IWA6 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC20.48■□□□□ 0.87
CCDC60Q8IWA6 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
CCDC60Q8IWA6 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC60Q8IWA6 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC60Q8IWA6 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC60Q8IWA6 KRT18P1-202ENST00000452408 1331 ntBASIC20.48■□□□□ 0.87
CCDC60Q8IWA6 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC20.48■□□□□ 0.87
CCDC60Q8IWA6 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC60Q8IWA6 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC60Q8IWA6 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC60Q8IWA6 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC20.47■□□□□ 0.87
CCDC60Q8IWA6 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC60Q8IWA6 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC60Q8IWA6 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC60Q8IWA6 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC20.47■□□□□ 0.87
CCDC60Q8IWA6 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC60Q8IWA6 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC60Q8IWA6 HES2-202ENST00000377836 507 ntTSL 2 BASIC20.47■□□□□ 0.87
CCDC60Q8IWA6 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC60Q8IWA6 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC20.47■□□□□ 0.87
CCDC60Q8IWA6 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC20.47■□□□□ 0.87
CCDC60Q8IWA6 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC20.47■□□□□ 0.87
CCDC60Q8IWA6 PPOX-214ENST00000535223 664 ntTSL 3 BASIC20.47■□□□□ 0.87
CCDC60Q8IWA6 TPSP2-201ENST00000561760 610 ntBASIC20.47■□□□□ 0.87
CCDC60Q8IWA6 MPI-205ENST00000562606 1052 ntTSL 3 BASIC20.47■□□□□ 0.87
CCDC60Q8IWA6 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC60Q8IWA6 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC60Q8IWA6 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC20.47■□□□□ 0.87
CCDC60Q8IWA6 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC60Q8IWA6 AL024508.2-201ENST00000607749 1894 ntBASIC20.47■□□□□ 0.87
CCDC60Q8IWA6 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC60Q8IWA6 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
CCDC60Q8IWA6 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC60Q8IWA6 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC60Q8IWA6 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC60Q8IWA6 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms