Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 CD81-212ENST00000526072 1172 ntTSL 5 BASIC17.64■□□□□ 0.41
RAB43Q86YS6 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC17.64■□□□□ 0.41
RAB43Q86YS6 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RAB43Q86YS6 AC116407.4-201ENST00000623319 1061 ntBASIC17.64■□□□□ 0.41
RAB43Q86YS6 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RAB43Q86YS6 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
RAB43Q86YS6 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RAB43Q86YS6 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
RAB43Q86YS6 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
RAB43Q86YS6 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RAB43Q86YS6 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC17.64■□□□□ 0.41
RAB43Q86YS6 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RAB43Q86YS6 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
RAB43Q86YS6 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RAB43Q86YS6 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC17.64■□□□□ 0.41
RAB43Q86YS6 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC17.63■□□□□ 0.41
RAB43Q86YS6 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC17.63■□□□□ 0.41
RAB43Q86YS6 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
RAB43Q86YS6 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC17.63■□□□□ 0.41
RAB43Q86YS6 GAS2L1P1-201ENST00000420145 1480 ntBASIC17.63■□□□□ 0.41
RAB43Q86YS6 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RAB43Q86YS6 AC093484.2-201ENST00000580996 2166 ntBASIC17.63■□□□□ 0.41
RAB43Q86YS6 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC17.63■□□□□ 0.41
RAB43Q86YS6 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
RAB43Q86YS6 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RAB43Q86YS6 MCCD1P1-208ENST00000445732 328 ntBASIC17.63■□□□□ 0.41
RAB43Q86YS6 KRT18P56-201ENST00000507275 550 ntBASIC17.63■□□□□ 0.41
RAB43Q86YS6 LY6E-213ENST00000522528 606 ntTSL 3 BASIC17.63■□□□□ 0.41
RAB43Q86YS6 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RAB43Q86YS6 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC17.63■□□□□ 0.41
RAB43Q86YS6 FGF14-AS2-201ENST00000606448 1074 ntBASIC17.63■□□□□ 0.41
RAB43Q86YS6 AC069148.1-201ENST00000608741 768 ntBASIC17.63■□□□□ 0.41
RAB43Q86YS6 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RAB43Q86YS6 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
RAB43Q86YS6 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RAB43Q86YS6 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RAB43Q86YS6 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RAB43Q86YS6 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RAB43Q86YS6 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC17.63■□□□□ 0.41
RAB43Q86YS6 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RAB43Q86YS6 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RAB43Q86YS6 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RAB43Q86YS6 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.63■□□□□ 0.41
RAB43Q86YS6 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC17.63■□□□□ 0.41
RAB43Q86YS6 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
RAB43Q86YS6 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RAB43Q86YS6 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RAB43Q86YS6 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RAB43Q86YS6 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RAB43Q86YS6 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC17.63■□□□□ 0.41
RAB43Q86YS6 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
RAB43Q86YS6 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
RAB43Q86YS6 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC17.63■□□□□ 0.41
RAB43Q86YS6 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
RAB43Q86YS6 AL138781.2-201ENST00000617896 1843 ntBASIC17.63■□□□□ 0.41
RAB43Q86YS6 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC17.63■□□□□ 0.41
RAB43Q86YS6 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
RAB43Q86YS6 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RAB43Q86YS6 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.62■□□□□ 0.41
RAB43Q86YS6 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RAB43Q86YS6 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RAB43Q86YS6 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RAB43Q86YS6 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC17.62■□□□□ 0.41
RAB43Q86YS6 GPAT2P1-201ENST00000444924 1672 ntBASIC17.62■□□□□ 0.41
RAB43Q86YS6 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RAB43Q86YS6 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
RAB43Q86YS6 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC17.62■□□□□ 0.41
RAB43Q86YS6 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
RAB43Q86YS6 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RAB43Q86YS6 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RAB43Q86YS6 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RAB43Q86YS6 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
RAB43Q86YS6 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC17.62■□□□□ 0.41
RAB43Q86YS6 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC17.62■□□□□ 0.41
RAB43Q86YS6 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
RAB43Q86YS6 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC17.62■□□□□ 0.41
RAB43Q86YS6 MIR3180-5-201ENST00000583743 153 ntBASIC17.62■□□□□ 0.41
RAB43Q86YS6 AC083849.1-201ENST00000615227 514 ntBASIC17.62■□□□□ 0.41
RAB43Q86YS6 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
RAB43Q86YS6 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
RAB43Q86YS6 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.62■□□□□ 0.41
RAB43Q86YS6 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RAB43Q86YS6 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.62■□□□□ 0.41
RAB43Q86YS6 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
RAB43Q86YS6 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RAB43Q86YS6 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
RAB43Q86YS6 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
RAB43Q86YS6 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RAB43Q86YS6 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
RAB43Q86YS6 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
RAB43Q86YS6 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC17.61■□□□□ 0.41
RAB43Q86YS6 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAB43Q86YS6 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAB43Q86YS6 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAB43Q86YS6 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAB43Q86YS6 GOLGA6L5P-202ENST00000515341 1828 ntBASIC17.61■□□□□ 0.41
RAB43Q86YS6 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.61■□□□□ 0.41
RAB43Q86YS6 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAB43Q86YS6 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAB43Q86YS6 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms