Protein–RNA interactions for Protein: Q86XS8

RNF130, E3 ubiquitin-protein ligase RNF130, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF130Q86XS8 AC116562.2-201ENST00000507042 360 ntBASIC17.41■□□□□ 0.38
RNF130Q86XS8 NUDT16P1-203ENST00000513809 620 ntBASIC17.41■□□□□ 0.38
RNF130Q86XS8 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC17.41■□□□□ 0.38
RNF130Q86XS8 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.41■□□□□ 0.38
RNF130Q86XS8 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
RNF130Q86XS8 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
RNF130Q86XS8 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RNF130Q86XS8 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RNF130Q86XS8 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
RNF130Q86XS8 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF130Q86XS8 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF130Q86XS8 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.4■□□□□ 0.38
RNF130Q86XS8 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
RNF130Q86XS8 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
RNF130Q86XS8 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
RNF130Q86XS8 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.4■□□□□ 0.38
RNF130Q86XS8 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF130Q86XS8 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF130Q86XS8 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RNF130Q86XS8 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF130Q86XS8 GPAT2P1-201ENST00000444924 1672 ntBASIC17.4■□□□□ 0.38
RNF130Q86XS8 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
RNF130Q86XS8 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.4■□□□□ 0.38
RNF130Q86XS8 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
RNF130Q86XS8 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF130Q86XS8 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF130Q86XS8 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF130Q86XS8 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC17.4■□□□□ 0.38
RNF130Q86XS8 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC17.4■□□□□ 0.38
RNF130Q86XS8 DGCR10-201ENST00000609839 495 ntBASIC17.4■□□□□ 0.38
RNF130Q86XS8 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
RNF130Q86XS8 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF130Q86XS8 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RNF130Q86XS8 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
RNF130Q86XS8 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF130Q86XS8 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF130Q86XS8 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF130Q86XS8 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF130Q86XS8 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
RNF130Q86XS8 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
RNF130Q86XS8 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RNF130Q86XS8 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RNF130Q86XS8 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RNF130Q86XS8 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RNF130Q86XS8 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RNF130Q86XS8 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RNF130Q86XS8 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.39■□□□□ 0.37
RNF130Q86XS8 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC17.39■□□□□ 0.37
RNF130Q86XS8 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC17.39■□□□□ 0.37
RNF130Q86XS8 RPS2P55-201ENST00000397318 883 ntBASIC17.39■□□□□ 0.37
RNF130Q86XS8 MCCD1P1-208ENST00000445732 328 ntBASIC17.39■□□□□ 0.37
RNF130Q86XS8 FDX2-206ENST00000492239 773 ntTSL 2 BASIC17.39■□□□□ 0.37
RNF130Q86XS8 AC107956.1-201ENST00000494359 873 ntBASIC17.39■□□□□ 0.37
RNF130Q86XS8 AC097488.1-201ENST00000507834 756 ntBASIC17.39■□□□□ 0.37
RNF130Q86XS8 KRT18P41-201ENST00000518924 1277 ntBASIC17.39■□□□□ 0.37
RNF130Q86XS8 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC17.39■□□□□ 0.37
RNF130Q86XS8 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RNF130Q86XS8 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
RNF130Q86XS8 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
RNF130Q86XS8 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RNF130Q86XS8 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.39■□□□□ 0.37
RNF130Q86XS8 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RNF130Q86XS8 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RNF130Q86XS8 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
RNF130Q86XS8 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RNF130Q86XS8 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
RNF130Q86XS8 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.39■□□□□ 0.37
RNF130Q86XS8 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RNF130Q86XS8 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RNF130Q86XS8 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RNF130Q86XS8 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.38■□□□□ 0.37
RNF130Q86XS8 ESPNP-201ENST00000270691 2015 ntBASIC17.38■□□□□ 0.37
RNF130Q86XS8 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
RNF130Q86XS8 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
RNF130Q86XS8 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
RNF130Q86XS8 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC17.38■□□□□ 0.37
RNF130Q86XS8 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RNF130Q86XS8 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RNF130Q86XS8 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.38■□□□□ 0.37
RNF130Q86XS8 AC093677.2-201ENST00000600169 1863 ntBASIC17.38■□□□□ 0.37
RNF130Q86XS8 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
RNF130Q86XS8 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RNF130Q86XS8 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RNF130Q86XS8 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RNF130Q86XS8 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RNF130Q86XS8 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
RNF130Q86XS8 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RNF130Q86XS8 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
RNF130Q86XS8 MIR564-202ENST00000385049 94 ntBASIC17.38■□□□□ 0.37
RNF130Q86XS8 GCSHP5-201ENST00000443090 522 ntBASIC17.38■□□□□ 0.37
RNF130Q86XS8 UBE2SP1-201ENST00000450587 669 ntBASIC17.38■□□□□ 0.37
RNF130Q86XS8 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RNF130Q86XS8 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
RNF130Q86XS8 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC17.38■□□□□ 0.37
RNF130Q86XS8 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC17.38■□□□□ 0.37
RNF130Q86XS8 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC17.38■□□□□ 0.37
RNF130Q86XS8 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC17.38■□□□□ 0.37
RNF130Q86XS8 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC17.38■□□□□ 0.37
RNF130Q86XS8 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RNF130Q86XS8 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms