Protein–RNA interactions for Protein: Q86UN3

RTN4RL2, Reticulon-4 receptor-like 2, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4RL2Q86UN3 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
RTN4RL2Q86UN3 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC15.78■□□□□ 0.12
RTN4RL2Q86UN3 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC15.78■□□□□ 0.12
RTN4RL2Q86UN3 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC15.78■□□□□ 0.12
RTN4RL2Q86UN3 AF186192.3-201ENST00000583427 947 ntBASIC15.78■□□□□ 0.12
RTN4RL2Q86UN3 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC15.78■□□□□ 0.12
RTN4RL2Q86UN3 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
RTN4RL2Q86UN3 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC15.78■□□□□ 0.12
RTN4RL2Q86UN3 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RTN4RL2Q86UN3 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
RTN4RL2Q86UN3 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RTN4RL2Q86UN3 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RTN4RL2Q86UN3 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RTN4RL2Q86UN3 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC15.78■□□□□ 0.12
RTN4RL2Q86UN3 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
RTN4RL2Q86UN3 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RTN4RL2Q86UN3 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC15.78■□□□□ 0.12
RTN4RL2Q86UN3 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC15.78■□□□□ 0.12
RTN4RL2Q86UN3 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC15.78■□□□□ 0.12
RTN4RL2Q86UN3 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RTN4RL2Q86UN3 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
RTN4RL2Q86UN3 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC15.78■□□□□ 0.12
RTN4RL2Q86UN3 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RTN4RL2Q86UN3 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC15.77■□□□□ 0.12
RTN4RL2Q86UN3 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
RTN4RL2Q86UN3 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RTN4RL2Q86UN3 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
RTN4RL2Q86UN3 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC15.77■□□□□ 0.12
RTN4RL2Q86UN3 AC008556.1-201ENST00000610908 2040 ntBASIC15.77■□□□□ 0.12
RTN4RL2Q86UN3 MME-217ENST00000616757 1315 ntTSL 5 BASIC15.77■□□□□ 0.12
RTN4RL2Q86UN3 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.12
RTN4RL2Q86UN3 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RTN4RL2Q86UN3 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
RTN4RL2Q86UN3 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
RTN4RL2Q86UN3 AC012618.2-201ENST00000428058 849 ntBASIC15.77■□□□□ 0.12
RTN4RL2Q86UN3 AC008040.2-201ENST00000461049 708 ntBASIC15.77■□□□□ 0.12
RTN4RL2Q86UN3 AC091390.4-202ENST00000476426 537 ntBASIC15.77■□□□□ 0.12
RTN4RL2Q86UN3 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
RTN4RL2Q86UN3 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.12
RTN4RL2Q86UN3 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
RTN4RL2Q86UN3 TK2-204ENST00000525974 1178 ntTSL 2 BASIC15.77■□□□□ 0.12
RTN4RL2Q86UN3 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
RTN4RL2Q86UN3 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
RTN4RL2Q86UN3 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC15.77■□□□□ 0.12
RTN4RL2Q86UN3 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC15.77■□□□□ 0.12
RTN4RL2Q86UN3 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC15.77■□□□□ 0.12
RTN4RL2Q86UN3 ABBA01031674.1-201ENST00000635145 728 ntBASIC15.77■□□□□ 0.12
RTN4RL2Q86UN3 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
RTN4RL2Q86UN3 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC15.77■□□□□ 0.11
RTN4RL2Q86UN3 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
RTN4RL2Q86UN3 RCC2P3-201ENST00000418112 1537 ntBASIC15.77■□□□□ 0.11
RTN4RL2Q86UN3 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
RTN4RL2Q86UN3 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
RTN4RL2Q86UN3 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
RTN4RL2Q86UN3 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
RTN4RL2Q86UN3 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
RTN4RL2Q86UN3 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
RTN4RL2Q86UN3 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RTN4RL2Q86UN3 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RTN4RL2Q86UN3 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
RTN4RL2Q86UN3 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC15.76■□□□□ 0.11
RTN4RL2Q86UN3 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RTN4RL2Q86UN3 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RTN4RL2Q86UN3 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RTN4RL2Q86UN3 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RTN4RL2Q86UN3 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC15.76■□□□□ 0.11
RTN4RL2Q86UN3 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC15.76■□□□□ 0.11
RTN4RL2Q86UN3 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
RTN4RL2Q86UN3 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RTN4RL2Q86UN3 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RTN4RL2Q86UN3 RPS2P4-201ENST00000476944 856 ntBASIC15.76■□□□□ 0.11
RTN4RL2Q86UN3 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RTN4RL2Q86UN3 FDX2-207ENST00000494368 584 ntTSL 4 BASIC15.76■□□□□ 0.11
RTN4RL2Q86UN3 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC15.76■□□□□ 0.11
RTN4RL2Q86UN3 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC15.76■□□□□ 0.11
RTN4RL2Q86UN3 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC15.76■□□□□ 0.11
RTN4RL2Q86UN3 RPS15-203ENST00000586096 570 ntTSL 2 BASIC15.76■□□□□ 0.11
RTN4RL2Q86UN3 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC15.76■□□□□ 0.11
RTN4RL2Q86UN3 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC15.76■□□□□ 0.11
RTN4RL2Q86UN3 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC15.76■□□□□ 0.11
RTN4RL2Q86UN3 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
RTN4RL2Q86UN3 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
RTN4RL2Q86UN3 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RTN4RL2Q86UN3 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC15.76■□□□□ 0.11
RTN4RL2Q86UN3 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RTN4RL2Q86UN3 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RTN4RL2Q86UN3 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RTN4RL2Q86UN3 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RTN4RL2Q86UN3 KRT16P1-201ENST00000399124 1418 ntBASIC15.76■□□□□ 0.11
RTN4RL2Q86UN3 KRT8P45-201ENST00000414328 1447 ntBASIC15.76■□□□□ 0.11
RTN4RL2Q86UN3 KRT8P3-201ENST00000519669 1449 ntBASIC15.76■□□□□ 0.11
RTN4RL2Q86UN3 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RTN4RL2Q86UN3 POR-209ENST00000439269 1858 ntTSL 2 BASIC15.76■□□□□ 0.11
RTN4RL2Q86UN3 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RTN4RL2Q86UN3 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RTN4RL2Q86UN3 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
RTN4RL2Q86UN3 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC15.76■□□□□ 0.11
RTN4RL2Q86UN3 AC099398.1-201ENST00000567919 2776 ntBASIC15.75■□□□□ 0.11
RTN4RL2Q86UN3 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
RTN4RL2Q86UN3 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms