Protein–RNA interactions for Protein: Q71RC2

LARP4, La-related protein 4, humanhuman

Known RBP eCLIP

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4Q71RC2 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.461e-11■■□□□ 12.1
LARP4Q71RC2 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.461e-11■■□□□ 12.1
LARP4Q71RC2 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC5.54□□□□□ -1.521e-11■■□□□ 12.1
LARP4Q71RC2 MGST1-211ENST00000538857 535 ntTSL 33.74□□□□□ -1.811e-11■■□□□ 12.1
LARP4Q71RC2 FLII-227ENST00000581858 644 ntTSL 515.78■□□□□ 0.123e-6■■□□□ 12.1
LARP4Q71RC2 FLII-216ENST00000577398 926 ntTSL 215.78■□□□□ 0.123e-6■■□□□ 12.1
LARP4Q71RC2 FLII-221ENST00000578558 2377 ntTSL 5 BASIC15.48■□□□□ 0.073e-6■■□□□ 12.1
LARP4Q71RC2 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.133e-6■■□□□ 12.1
LARP4Q71RC2 FLII-220ENST00000578101 4148 ntTSL 210.85□□□□□ -0.673e-6■■□□□ 12.1
LARP4Q71RC2 FLII-222ENST00000579294 3936 ntTSL 1 (best) BASIC10.58□□□□□ -0.723e-6■■□□□ 12.1
LARP4Q71RC2 FLII-215ENST00000545457 3975 ntTSL 2 BASIC9.86□□□□□ -0.833e-6■■□□□ 12.1
LARP4Q71RC2 GPX4-204ENST00000587648 536 ntTSL 28.42□□□□□ -1.069e-10■■□□□ 12.1
LARP4Q71RC2 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.124e-8■■□□□ 12.1
LARP4Q71RC2 CAMK1-202ENST00000397277 1423 ntTSL 519.55■□□□□ 0.724e-8■■□□□ 12.1
LARP4Q71RC2 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC19.27■□□□□ 0.684e-8■■□□□ 12.1
LARP4Q71RC2 CAMK1-206ENST00000496534 1487 ntTSL 217.69■□□□□ 0.424e-8■■□□□ 12.1
LARP4Q71RC2 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.45e-8■■□□□ 12.1
LARP4Q71RC2 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.44e-8■■□□□ 12.1
LARP4Q71RC2 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC16.32■□□□□ 0.24e-8■■□□□ 12.1
LARP4Q71RC2 CAMK1-204ENST00000421120 950 ntTSL 216.2■□□□□ 0.184e-8■■□□□ 12.1
LARP4Q71RC2 CAMK1-205ENST00000482803 587 ntTSL 215.9■□□□□ 0.144e-8■■□□□ 12.1
LARP4Q71RC2 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.082e-6■■□□□ 12.1
LARP4Q71RC2 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.162e-6■■□□□ 12.1
LARP4Q71RC2 ERAL1-201ENST00000254928 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.24e-8■■□□□ 12.1
LARP4Q71RC2 ERAL1-203ENST00000461894 1628 ntTSL 1 (best)12.69□□□□□ -0.384e-8■■□□□ 12.1
LARP4Q71RC2 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC12.66□□□□□ -0.384e-8■■□□□ 12.1
LARP4Q71RC2 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC12.66□□□□□ -0.384e-8■■□□□ 12.1
LARP4Q71RC2 PDCD5-201ENST00000221784 558 ntTSL 312.56□□□□□ -0.44e-8■■□□□ 12.1
LARP4Q71RC2 LMAN2L-203ENST00000434524 2410 ntTSL 512.1□□□□□ -0.472e-6■■□□□ 12.1
LARP4Q71RC2 ERAL1-208ENST00000583487 695 ntTSL 311.13□□□□□ -0.634e-8■■□□□ 12.1
LARP4Q71RC2 WDR82-204ENST00000487402 4333 ntTSL 210.13□□□□□ -0.794e-8■■□□□ 12.1
LARP4Q71RC2 ERAL1-204ENST00000471992 1508 ntTSL 58.91□□□□□ -0.984e-8■■□□□ 12.1
LARP4Q71RC2 PDCD5-205ENST00000586316 480 ntTSL 25□□□□□ -1.614e-8■■□□□ 12.1
LARP4Q71RC2 CARHSP1-206ENST00000563815 1913 ntTSL 219.26■□□□□ 0.672e-7■■□□□ 12.1
LARP4Q71RC2 RPS20-203ENST00000519369 824 ntTSL 212.27□□□□□ -0.451e-11■■□□□ 12
LARP4Q71RC2 RPS20-209ENST00000521289 737 ntTSL 59.92□□□□□ -0.821e-11■■□□□ 12
LARP4Q71RC2 RPS20-202ENST00000518875 671 ntTSL 2 BASIC6.59□□□□□ -1.351e-11■■□□□ 12
LARP4Q71RC2 SPARC-202ENST00000520687 1598 ntTSL 29.87□□□□□ -0.832e-6■■□□□ 12
LARP4Q71RC2 SPARC-201ENST00000231061 3701 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.162e-6■■□□□ 12
LARP4Q71RC2 TMEM161B-AS1-205ENST00000504769 548 ntTSL 414.49□□□□□ -0.097e-7■■□□□ 12
LARP4Q71RC2 CYB5A-206ENST00000580678 1173 ntTSL 1 (best)7.44□□□□□ -1.222e-11■■□□□ 12
LARP4Q71RC2 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC20.11■□□□□ 0.816e-13■■□□□ 12
LARP4Q71RC2 SRRM2-218ENST00000574331 1759 ntTSL 217.38■□□□□ 0.376e-13■■□□□ 12
LARP4Q71RC2 SRRM2-217ENST00000573692 459 ntTSL 316.46■□□□□ 0.236e-13■■□□□ 12
LARP4Q71RC2 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.26e-13■■□□□ 12
LARP4Q71RC2 SRRM2-202ENST00000570539 431 ntTSL 29.27□□□□□ -0.936e-13■■□□□ 12
LARP4Q71RC2 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.472e-8■■□□□ 12
LARP4Q71RC2 APOE-203ENST00000434152 864 ntTSL 218.75■□□□□ 0.592e-32■■□□□ 12
LARP4Q71RC2 RPS17-210ENST00000561440 1922 ntTSL 216.84■□□□□ 0.291e-13■■□□□ 12
LARP4Q71RC2 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.039e-14■■□□□ 12
LARP4Q71RC2 RPS17-205ENST00000560229 776 ntTSL 1 (best)12.29□□□□□ -0.449e-14■■□□□ 12
LARP4Q71RC2 RPS17-209ENST00000561157 1909 ntTSL 2 BASIC8.19□□□□□ -1.19e-14■■□□□ 12
LARP4Q71RC2 RPS17-206ENST00000560612 1877 ntTSL 27.96□□□□□ -1.131e-13■■□□□ 12
LARP4Q71RC2 RPS17-207ENST00000560639 932 ntTSL 55.48□□□□□ -1.539e-14■■□□□ 12
LARP4Q71RC2 RPS17-202ENST00000558397 583 ntTSL 34.51□□□□□ -1.699e-14■■□□□ 12
LARP4Q71RC2 RPS17-208ENST00000561068 522 ntTSL 34.34□□□□□ -1.711e-13■■□□□ 12
LARP4Q71RC2 PFKL-205ENST00000466134 5986 ntTSL 219.16■□□□□ 0.663e-10■■□□□ 12
LARP4Q71RC2 PFKL-206ENST00000467315 1947 ntTSL 218.96■□□□□ 0.633e-10■■□□□ 12
LARP4Q71RC2 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.373e-10■■□□□ 12
LARP4Q71RC2 PFKL-207ENST00000474114 6007 ntTSL 1 (best)17.35■□□□□ 0.373e-10■■□□□ 12
LARP4Q71RC2 PFKL-211ENST00000498841 3122 ntTSL 1 (best)16.41■□□□□ 0.223e-10■■□□□ 12
LARP4Q71RC2 PFKL-202ENST00000397961 3390 ntTSL 1 (best)14.66□□□□□ -0.063e-10■■□□□ 12
LARP4Q71RC2 PFKL-204ENST00000460521 2818 ntTSL 214.25□□□□□ -0.133e-10■■□□□ 12
LARP4Q71RC2 SNHG5-204ENST00000425170 489 ntTSL 26.67□□□□□ -1.342e-10■■□□□ 12
LARP4Q71RC2 AC008760.2-201ENST00000614781 1357 ntBASIC10.76□□□□□ -0.693e-9■■□□□ 12
LARP4Q71RC2 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.411e-7■■□□□ 12
LARP4Q71RC2 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.371e-7■■□□□ 12
LARP4Q71RC2 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.331e-7■■□□□ 12
LARP4Q71RC2 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.31e-7■■□□□ 12
LARP4Q71RC2 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.251e-7■■□□□ 12
LARP4Q71RC2 DAG1-218ENST00000515359 5576 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.511e-7■■□□□ 12
LARP4Q71RC2 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC16■□□□□ 0.156e-8■■□□□ 12
LARP4Q71RC2 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.638e-7■■□□□ 12
LARP4Q71RC2 SPATA20-205ENST00000503127 2734 ntTSL 1 (best)16.62■□□□□ 0.258e-7■■□□□ 12
LARP4Q71RC2 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC15.67■□□□□ 0.18e-7■■□□□ 12
LARP4Q71RC2 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC14.96□□□□□ -0.018e-7■■□□□ 12
LARP4Q71RC2 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.158e-7■■□□□ 12
LARP4Q71RC2 SPATA20-220ENST00000511937 2669 ntTSL 1 (best)13.19□□□□□ -0.38e-7■■□□□ 12
LARP4Q71RC2 SPATA20-208ENST00000504334 3539 ntTSL 212.87□□□□□ -0.358e-7■■□□□ 12
LARP4Q71RC2 SPATA20-204ENST00000503063 3232 ntTSL 212.46□□□□□ -0.418e-7■■□□□ 12
LARP4Q71RC2 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC23.9■■□□□ 1.422e-8■■□□□ 12
LARP4Q71RC2 TXNL4A-204ENST00000585769 988 ntTSL 220.18■□□□□ 0.822e-8■■□□□ 12
LARP4Q71RC2 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC18.46■□□□□ 0.552e-8■■□□□ 12
LARP4Q71RC2 TXNL4A-202ENST00000355491 803 ntTSL 1 (best)18.25■□□□□ 0.512e-8■■□□□ 12
LARP4Q71RC2 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.392e-8■■□□□ 12
LARP4Q71RC2 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC17.16■□□□□ 0.342e-8■■□□□ 12
LARP4Q71RC2 TXNL4A-206ENST00000586612 448 ntTSL 316.17■□□□□ 0.182e-8■■□□□ 12
LARP4Q71RC2 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC13.68□□□□□ -0.222e-8■■□□□ 12
LARP4Q71RC2 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.775e-11■■□□□ 12
LARP4Q71RC2 RPL8-203ENST00000525232 1007 ntTSL 1 (best)18.91■□□□□ 0.625e-17■■□□□ 12
LARP4Q71RC2 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.255e-11■■□□□ 12
LARP4Q71RC2 RPL8-212ENST00000532702 745 ntTSL 214.11□□□□□ -0.153e-16■■□□□ 12
LARP4Q71RC2 RPL8-205ENST00000527914 551 ntTSL 3 BASIC13.86□□□□□ -0.195e-11■■□□□ 12
LARP4Q71RC2 RPL8-208ENST00000529163 556 ntTSL 210.46□□□□□ -0.735e-11■■□□□ 12
LARP4Q71RC2 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.382e-29■■□□□ 12
LARP4Q71RC2 EBP-206ENST00000498425 796 ntTSL 313.49□□□□□ -0.256e-8■■□□□ 12
LARP4Q71RC2 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC23.43■■□□□ 1.347e-11■■□□□ 12
LARP4Q71RC2 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC13.83□□□□□ -0.197e-11■■□□□ 12
LARP4Q71RC2 RANBP1-211ENST00000448394 688 ntTSL 213.36□□□□□ -0.277e-11■■□□□ 12
LARP4Q71RC2 ERGIC3-217ENST00000488935 389 ntTSL 214.41□□□□□ -0.13e-8■■□□□ 12
Retrieved 100 of 15,922 protein–RNA pairs in 243 ms