Protein–RNA interactions for Protein: Q71F78

LCA10, Putative lung carcinoma-associated protein 10, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCA10Q71F78 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC9.98□□□□□ -0.81
LCA10Q71F78 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
LCA10Q71F78 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC9.98□□□□□ -0.81
LCA10Q71F78 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC9.98□□□□□ -0.81
LCA10Q71F78 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC9.98□□□□□ -0.81
LCA10Q71F78 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
LCA10Q71F78 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC9.98□□□□□ -0.81
LCA10Q71F78 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC9.98□□□□□ -0.81
LCA10Q71F78 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC9.98□□□□□ -0.81
LCA10Q71F78 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC9.98□□□□□ -0.81
LCA10Q71F78 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
LCA10Q71F78 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
LCA10Q71F78 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
LCA10Q71F78 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
LCA10Q71F78 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
LCA10Q71F78 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC9.98□□□□□ -0.81
LCA10Q71F78 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
LCA10Q71F78 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
LCA10Q71F78 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
LCA10Q71F78 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC9.98□□□□□ -0.81
LCA10Q71F78 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
LCA10Q71F78 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
LCA10Q71F78 IRS3P-201ENST00000223076 1006 ntBASIC9.98□□□□□ -0.81
LCA10Q71F78 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
LCA10Q71F78 AC142381.2-201ENST00000566120 298 ntBASIC9.98□□□□□ -0.81
LCA10Q71F78 RALB-208ENST00000631312 311 ntTSL 5 BASIC9.98□□□□□ -0.81
LCA10Q71F78 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
LCA10Q71F78 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
LCA10Q71F78 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC9.98□□□□□ -0.81
LCA10Q71F78 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
LCA10Q71F78 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
LCA10Q71F78 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
LCA10Q71F78 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
LCA10Q71F78 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
LCA10Q71F78 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
LCA10Q71F78 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
LCA10Q71F78 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC9.98□□□□□ -0.81
LCA10Q71F78 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
LCA10Q71F78 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
LCA10Q71F78 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC9.98□□□□□ -0.81
LCA10Q71F78 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
LCA10Q71F78 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC9.98□□□□□ -0.81
LCA10Q71F78 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
LCA10Q71F78 TREX1-205ENST00000625293 1783 ntBASIC9.98□□□□□ -0.81
LCA10Q71F78 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC9.98□□□□□ -0.81
LCA10Q71F78 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
LCA10Q71F78 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
LCA10Q71F78 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC9.98□□□□□ -0.81
LCA10Q71F78 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
LCA10Q71F78 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
LCA10Q71F78 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
LCA10Q71F78 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC9.98□□□□□ -0.81
LCA10Q71F78 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
LCA10Q71F78 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC9.98□□□□□ -0.81
LCA10Q71F78 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC9.97□□□□□ -0.81
LCA10Q71F78 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
LCA10Q71F78 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
LCA10Q71F78 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
LCA10Q71F78 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
LCA10Q71F78 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
LCA10Q71F78 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
LCA10Q71F78 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC9.97□□□□□ -0.81
LCA10Q71F78 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC9.97□□□□□ -0.81
LCA10Q71F78 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
LCA10Q71F78 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
LCA10Q71F78 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
LCA10Q71F78 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
LCA10Q71F78 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC9.97□□□□□ -0.81
LCA10Q71F78 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
LCA10Q71F78 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
LCA10Q71F78 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
LCA10Q71F78 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
LCA10Q71F78 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC9.97□□□□□ -0.81
LCA10Q71F78 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
LCA10Q71F78 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC9.97□□□□□ -0.81
LCA10Q71F78 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
LCA10Q71F78 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
LCA10Q71F78 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
LCA10Q71F78 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC9.97□□□□□ -0.81
LCA10Q71F78 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
LCA10Q71F78 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
LCA10Q71F78 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
LCA10Q71F78 STOX2-205ENST00000513034 807 ntTSL 3 BASIC9.97□□□□□ -0.81
LCA10Q71F78 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
LCA10Q71F78 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC9.97□□□□□ -0.81
LCA10Q71F78 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
LCA10Q71F78 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC9.97□□□□□ -0.81
LCA10Q71F78 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC9.97□□□□□ -0.81
LCA10Q71F78 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC9.97□□□□□ -0.81
LCA10Q71F78 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
LCA10Q71F78 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
LCA10Q71F78 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
LCA10Q71F78 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
LCA10Q71F78 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
LCA10Q71F78 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC9.97□□□□□ -0.81
LCA10Q71F78 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
LCA10Q71F78 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
LCA10Q71F78 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
LCA10Q71F78 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
LCA10Q71F78 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC9.97□□□□□ -0.81
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms