Protein–RNA interactions for Protein: Q6ZS62

COLCA1, Colorectal cancer-associated protein 1, humanhuman

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1Q6ZS62 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC15.9■□□□□ 0.14
COLCA1Q6ZS62 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
COLCA1Q6ZS62 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
COLCA1Q6ZS62 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
COLCA1Q6ZS62 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC15.9■□□□□ 0.14
COLCA1Q6ZS62 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC15.9■□□□□ 0.14
COLCA1Q6ZS62 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
COLCA1Q6ZS62 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC15.9■□□□□ 0.14
COLCA1Q6ZS62 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
COLCA1Q6ZS62 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
COLCA1Q6ZS62 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC15.9■□□□□ 0.14
COLCA1Q6ZS62 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC15.9■□□□□ 0.14
COLCA1Q6ZS62 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC15.9■□□□□ 0.14
COLCA1Q6ZS62 AC024243.1-201ENST00000609234 778 ntBASIC15.9■□□□□ 0.14
COLCA1Q6ZS62 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
COLCA1Q6ZS62 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
COLCA1Q6ZS62 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC15.9■□□□□ 0.14
COLCA1Q6ZS62 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
COLCA1Q6ZS62 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
COLCA1Q6ZS62 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC15.9■□□□□ 0.14
COLCA1Q6ZS62 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
COLCA1Q6ZS62 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
COLCA1Q6ZS62 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
COLCA1Q6ZS62 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
COLCA1Q6ZS62 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC15.9■□□□□ 0.14
COLCA1Q6ZS62 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC15.9■□□□□ 0.14
COLCA1Q6ZS62 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
COLCA1Q6ZS62 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
COLCA1Q6ZS62 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
COLCA1Q6ZS62 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
COLCA1Q6ZS62 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
COLCA1Q6ZS62 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC15.89■□□□□ 0.13
COLCA1Q6ZS62 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
COLCA1Q6ZS62 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
COLCA1Q6ZS62 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
COLCA1Q6ZS62 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
COLCA1Q6ZS62 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC15.89■□□□□ 0.13
COLCA1Q6ZS62 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC15.89■□□□□ 0.13
COLCA1Q6ZS62 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
COLCA1Q6ZS62 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
COLCA1Q6ZS62 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC15.89■□□□□ 0.13
COLCA1Q6ZS62 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
COLCA1Q6ZS62 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC15.89■□□□□ 0.13
COLCA1Q6ZS62 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC15.89■□□□□ 0.13
COLCA1Q6ZS62 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC15.89■□□□□ 0.13
COLCA1Q6ZS62 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC15.89■□□□□ 0.13
COLCA1Q6ZS62 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC15.89■□□□□ 0.13
COLCA1Q6ZS62 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC15.89■□□□□ 0.13
COLCA1Q6ZS62 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
COLCA1Q6ZS62 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
COLCA1Q6ZS62 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC15.89■□□□□ 0.13
COLCA1Q6ZS62 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
COLCA1Q6ZS62 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
COLCA1Q6ZS62 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
COLCA1Q6ZS62 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC15.89■□□□□ 0.13
COLCA1Q6ZS62 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
COLCA1Q6ZS62 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
COLCA1Q6ZS62 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
COLCA1Q6ZS62 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
COLCA1Q6ZS62 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
COLCA1Q6ZS62 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
COLCA1Q6ZS62 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
COLCA1Q6ZS62 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
COLCA1Q6ZS62 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC15.88■□□□□ 0.13
COLCA1Q6ZS62 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
COLCA1Q6ZS62 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC15.88■□□□□ 0.13
COLCA1Q6ZS62 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC15.88■□□□□ 0.13
COLCA1Q6ZS62 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
COLCA1Q6ZS62 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
COLCA1Q6ZS62 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
COLCA1Q6ZS62 AC113347.1-201ENST00000413321 391 ntBASIC15.88■□□□□ 0.13
COLCA1Q6ZS62 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC15.88■□□□□ 0.13
COLCA1Q6ZS62 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
COLCA1Q6ZS62 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC15.88■□□□□ 0.13
COLCA1Q6ZS62 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC15.88■□□□□ 0.13
COLCA1Q6ZS62 AC010203.1-204ENST00000548782 407 ntBASIC15.88■□□□□ 0.13
COLCA1Q6ZS62 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC15.88■□□□□ 0.13
COLCA1Q6ZS62 MIR3917-201ENST00000580971 93 ntBASIC15.88■□□□□ 0.13
COLCA1Q6ZS62 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC15.88■□□□□ 0.13
COLCA1Q6ZS62 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC15.88■□□□□ 0.13
COLCA1Q6ZS62 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC15.88■□□□□ 0.13
COLCA1Q6ZS62 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
COLCA1Q6ZS62 AC005363.2-201ENST00000618631 242 ntBASIC15.88■□□□□ 0.13
COLCA1Q6ZS62 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC15.88■□□□□ 0.13
COLCA1Q6ZS62 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
COLCA1Q6ZS62 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC15.88■□□□□ 0.13
COLCA1Q6ZS62 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
COLCA1Q6ZS62 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC15.88■□□□□ 0.13
COLCA1Q6ZS62 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
COLCA1Q6ZS62 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
COLCA1Q6ZS62 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
COLCA1Q6ZS62 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
COLCA1Q6ZS62 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC15.88■□□□□ 0.13
COLCA1Q6ZS62 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC15.88■□□□□ 0.13
COLCA1Q6ZS62 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
COLCA1Q6ZS62 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC15.87■□□□□ 0.13
COLCA1Q6ZS62 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC15.87■□□□□ 0.13
COLCA1Q6ZS62 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC15.87■□□□□ 0.13
COLCA1Q6ZS62 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
COLCA1Q6ZS62 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms