Protein–RNA interactions for Protein: Q5T3J3

LRIF1, Ligand-dependent nuclear receptor-interacting factor 1, humanhuman

Predictions only

Length 769 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1Q5T3J3 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC17.44■□□□□ 0.38
LRIF1Q5T3J3 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
LRIF1Q5T3J3 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC17.44■□□□□ 0.38
LRIF1Q5T3J3 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.44■□□□□ 0.38
LRIF1Q5T3J3 LTB4R2-202ENST00000528054 3092 ntBASIC17.44■□□□□ 0.38
LRIF1Q5T3J3 KRT8P50-201ENST00000562022 1438 ntBASIC17.44■□□□□ 0.38
LRIF1Q5T3J3 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.44■□□□□ 0.38
LRIF1Q5T3J3 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LRIF1Q5T3J3 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.44■□□□□ 0.38
LRIF1Q5T3J3 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LRIF1Q5T3J3 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LRIF1Q5T3J3 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
LRIF1Q5T3J3 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC17.44■□□□□ 0.38
LRIF1Q5T3J3 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
LRIF1Q5T3J3 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
LRIF1Q5T3J3 GMCL1P1-201ENST00000463439 1581 ntBASIC17.44■□□□□ 0.38
LRIF1Q5T3J3 AL096828.2-201ENST00000567259 1965 ntBASIC17.44■□□□□ 0.38
LRIF1Q5T3J3 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LRIF1Q5T3J3 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LRIF1Q5T3J3 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC17.44■□□□□ 0.38
LRIF1Q5T3J3 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
LRIF1Q5T3J3 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LRIF1Q5T3J3 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
LRIF1Q5T3J3 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LRIF1Q5T3J3 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LRIF1Q5T3J3 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LRIF1Q5T3J3 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC17.43■□□□□ 0.38
LRIF1Q5T3J3 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
LRIF1Q5T3J3 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LRIF1Q5T3J3 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LRIF1Q5T3J3 AC096733.2-201ENST00000609937 1394 ntBASIC17.43■□□□□ 0.38
LRIF1Q5T3J3 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
LRIF1Q5T3J3 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LRIF1Q5T3J3 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LRIF1Q5T3J3 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
LRIF1Q5T3J3 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LRIF1Q5T3J3 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LRIF1Q5T3J3 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LRIF1Q5T3J3 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
LRIF1Q5T3J3 AC128676.1-201ENST00000454392 318 ntBASIC17.43■□□□□ 0.38
LRIF1Q5T3J3 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LRIF1Q5T3J3 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC17.43■□□□□ 0.38
LRIF1Q5T3J3 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC17.43■□□□□ 0.38
LRIF1Q5T3J3 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC17.43■□□□□ 0.38
LRIF1Q5T3J3 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC17.43■□□□□ 0.38
LRIF1Q5T3J3 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LRIF1Q5T3J3 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LRIF1Q5T3J3 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LRIF1Q5T3J3 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LRIF1Q5T3J3 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LRIF1Q5T3J3 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LRIF1Q5T3J3 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.43■□□□□ 0.38
LRIF1Q5T3J3 FSCN1P1-201ENST00000568912 1481 ntBASIC17.43■□□□□ 0.38
LRIF1Q5T3J3 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC17.43■□□□□ 0.38
LRIF1Q5T3J3 AC034236.2-201ENST00000606662 1610 ntBASIC17.43■□□□□ 0.38
LRIF1Q5T3J3 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LRIF1Q5T3J3 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.43■□□□□ 0.38
LRIF1Q5T3J3 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LRIF1Q5T3J3 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LRIF1Q5T3J3 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC17.42■□□□□ 0.38
LRIF1Q5T3J3 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.42■□□□□ 0.38
LRIF1Q5T3J3 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LRIF1Q5T3J3 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LRIF1Q5T3J3 GPAT2P1-201ENST00000444924 1672 ntBASIC17.42■□□□□ 0.38
LRIF1Q5T3J3 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
LRIF1Q5T3J3 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.42■□□□□ 0.38
LRIF1Q5T3J3 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC17.42■□□□□ 0.38
LRIF1Q5T3J3 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.42■□□□□ 0.38
LRIF1Q5T3J3 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LRIF1Q5T3J3 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LRIF1Q5T3J3 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
LRIF1Q5T3J3 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LRIF1Q5T3J3 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
LRIF1Q5T3J3 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LRIF1Q5T3J3 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LRIF1Q5T3J3 MCCD1P1-208ENST00000445732 328 ntBASIC17.42■□□□□ 0.38
LRIF1Q5T3J3 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
LRIF1Q5T3J3 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC17.42■□□□□ 0.38
LRIF1Q5T3J3 C1QBPP2-201ENST00000528754 825 ntBASIC17.42■□□□□ 0.38
LRIF1Q5T3J3 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
LRIF1Q5T3J3 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
LRIF1Q5T3J3 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LRIF1Q5T3J3 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LRIF1Q5T3J3 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
LRIF1Q5T3J3 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LRIF1Q5T3J3 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.41■□□□□ 0.38
LRIF1Q5T3J3 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC17.41■□□□□ 0.38
LRIF1Q5T3J3 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC17.41■□□□□ 0.38
LRIF1Q5T3J3 BCL2-203ENST00000589955 5011 ntBASIC17.41■□□□□ 0.38
LRIF1Q5T3J3 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LRIF1Q5T3J3 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LRIF1Q5T3J3 PHGDH-209ENST00000641074 1780 ntBASIC17.41■□□□□ 0.38
LRIF1Q5T3J3 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
LRIF1Q5T3J3 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
LRIF1Q5T3J3 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LRIF1Q5T3J3 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
LRIF1Q5T3J3 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
LRIF1Q5T3J3 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LRIF1Q5T3J3 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.41■□□□□ 0.38
LRIF1Q5T3J3 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms