Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC17.21■□□□□ 0.35
RFX4Q33E94 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.21■□□□□ 0.35
RFX4Q33E94 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RFX4Q33E94 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RFX4Q33E94 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RFX4Q33E94 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC17.21■□□□□ 0.35
RFX4Q33E94 THEM4-205ENST00000489410 643 ntTSL 2 BASIC17.21■□□□□ 0.35
RFX4Q33E94 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RFX4Q33E94 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC17.21■□□□□ 0.35
RFX4Q33E94 AL160286.2-201ENST00000567150 934 ntBASIC17.21■□□□□ 0.35
RFX4Q33E94 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
RFX4Q33E94 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC17.21■□□□□ 0.35
RFX4Q33E94 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC17.21■□□□□ 0.35
RFX4Q33E94 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC17.21■□□□□ 0.35
RFX4Q33E94 AC068587.9-201ENST00000641814 219 ntBASIC17.21■□□□□ 0.35
RFX4Q33E94 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RFX4Q33E94 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RFX4Q33E94 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RFX4Q33E94 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RFX4Q33E94 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RFX4Q33E94 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
RFX4Q33E94 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RFX4Q33E94 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
RFX4Q33E94 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
RFX4Q33E94 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.34
RFX4Q33E94 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RFX4Q33E94 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
RFX4Q33E94 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RFX4Q33E94 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RFX4Q33E94 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC17.2■□□□□ 0.34
RFX4Q33E94 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.2■□□□□ 0.34
RFX4Q33E94 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RFX4Q33E94 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
RFX4Q33E94 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
RFX4Q33E94 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC17.2■□□□□ 0.34
RFX4Q33E94 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RFX4Q33E94 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.2■□□□□ 0.34
RFX4Q33E94 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
RFX4Q33E94 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
RFX4Q33E94 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC17.2■□□□□ 0.34
RFX4Q33E94 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
RFX4Q33E94 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RFX4Q33E94 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC17.2■□□□□ 0.34
RFX4Q33E94 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
RFX4Q33E94 F2R-202ENST00000505600 442 ntTSL 2 BASIC17.2■□□□□ 0.34
RFX4Q33E94 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC17.2■□□□□ 0.34
RFX4Q33E94 AC142086.2-201ENST00000569753 217 ntBASIC17.2■□□□□ 0.34
RFX4Q33E94 Six3os1_6.1-201ENST00000620790 196 ntBASIC17.2■□□□□ 0.34
RFX4Q33E94 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC17.2■□□□□ 0.34
RFX4Q33E94 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RFX4Q33E94 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RFX4Q33E94 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.2■□□□□ 0.34
RFX4Q33E94 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
RFX4Q33E94 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.2■□□□□ 0.34
RFX4Q33E94 KRT8P45-201ENST00000414328 1447 ntBASIC17.2■□□□□ 0.34
RFX4Q33E94 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
RFX4Q33E94 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RFX4Q33E94 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RFX4Q33E94 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RFX4Q33E94 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RFX4Q33E94 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
RFX4Q33E94 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RFX4Q33E94 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RFX4Q33E94 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
RFX4Q33E94 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RFX4Q33E94 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
RFX4Q33E94 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RFX4Q33E94 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.19■□□□□ 0.34
RFX4Q33E94 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
RFX4Q33E94 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RFX4Q33E94 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RFX4Q33E94 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC17.19■□□□□ 0.34
RFX4Q33E94 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC17.19■□□□□ 0.34
RFX4Q33E94 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RFX4Q33E94 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
RFX4Q33E94 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RFX4Q33E94 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RFX4Q33E94 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
RFX4Q33E94 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RFX4Q33E94 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RFX4Q33E94 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.19■□□□□ 0.34
RFX4Q33E94 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
RFX4Q33E94 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.19■□□□□ 0.34
RFX4Q33E94 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.19■□□□□ 0.34
RFX4Q33E94 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RFX4Q33E94 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RFX4Q33E94 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC17.19■□□□□ 0.34
RFX4Q33E94 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RFX4Q33E94 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RFX4Q33E94 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RFX4Q33E94 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17.18■□□□□ 0.34
RFX4Q33E94 NBPF21P-201ENST00000425093 1451 ntBASIC17.18■□□□□ 0.34
RFX4Q33E94 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
RFX4Q33E94 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.18■□□□□ 0.34
RFX4Q33E94 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
RFX4Q33E94 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
RFX4Q33E94 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.18■□□□□ 0.34
RFX4Q33E94 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RFX4Q33E94 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
RFX4Q33E94 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms