Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CTC1Q2NKJ3 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
CTC1Q2NKJ3 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
CTC1Q2NKJ3 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CTC1Q2NKJ3 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CTC1Q2NKJ3 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CTC1Q2NKJ3 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CTC1Q2NKJ3 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC19.74■□□□□ 0.75
CTC1Q2NKJ3 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC19.74■□□□□ 0.75
CTC1Q2NKJ3 AC064862.7-201ENST00000604520 867 ntBASIC19.74■□□□□ 0.75
CTC1Q2NKJ3 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC19.74■□□□□ 0.75
CTC1Q2NKJ3 IGHV3-41-201ENST00000613121 348 ntBASIC19.74■□□□□ 0.75
CTC1Q2NKJ3 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC19.74■□□□□ 0.75
CTC1Q2NKJ3 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CTC1Q2NKJ3 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CTC1Q2NKJ3 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC19.74■□□□□ 0.75
CTC1Q2NKJ3 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CTC1Q2NKJ3 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CTC1Q2NKJ3 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CTC1Q2NKJ3 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
CTC1Q2NKJ3 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.74■□□□□ 0.75
CTC1Q2NKJ3 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CTC1Q2NKJ3 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC19.74■□□□□ 0.75
CTC1Q2NKJ3 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.74■□□□□ 0.75
CTC1Q2NKJ3 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CTC1Q2NKJ3 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
CTC1Q2NKJ3 Z82202.1-201ENST00000623446 1880 ntBASIC19.73■□□□□ 0.75
CTC1Q2NKJ3 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CTC1Q2NKJ3 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CTC1Q2NKJ3 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CTC1Q2NKJ3 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC19.73■□□□□ 0.75
CTC1Q2NKJ3 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CTC1Q2NKJ3 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CTC1Q2NKJ3 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CTC1Q2NKJ3 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.73■□□□□ 0.75
CTC1Q2NKJ3 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CTC1Q2NKJ3 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CTC1Q2NKJ3 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CTC1Q2NKJ3 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CTC1Q2NKJ3 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CTC1Q2NKJ3 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CTC1Q2NKJ3 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
CTC1Q2NKJ3 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC19.73■□□□□ 0.75
CTC1Q2NKJ3 BET1L-206ENST00000486280 665 ntTSL 3 BASIC19.73■□□□□ 0.75
CTC1Q2NKJ3 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC19.73■□□□□ 0.75
CTC1Q2NKJ3 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
CTC1Q2NKJ3 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
CTC1Q2NKJ3 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC19.73■□□□□ 0.75
CTC1Q2NKJ3 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
CTC1Q2NKJ3 Z69720.1-201ENST00000601483 472 ntBASIC19.73■□□□□ 0.75
CTC1Q2NKJ3 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CTC1Q2NKJ3 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CTC1Q2NKJ3 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CTC1Q2NKJ3 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
CTC1Q2NKJ3 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CTC1Q2NKJ3 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19.73■□□□□ 0.75
CTC1Q2NKJ3 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CTC1Q2NKJ3 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CTC1Q2NKJ3 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CTC1Q2NKJ3 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
CTC1Q2NKJ3 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CTC1Q2NKJ3 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC19.72■□□□□ 0.75
CTC1Q2NKJ3 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CTC1Q2NKJ3 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CTC1Q2NKJ3 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CTC1Q2NKJ3 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CTC1Q2NKJ3 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CTC1Q2NKJ3 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC19.72■□□□□ 0.75
CTC1Q2NKJ3 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CTC1Q2NKJ3 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
CTC1Q2NKJ3 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC19.72■□□□□ 0.75
CTC1Q2NKJ3 KRT8P3-201ENST00000519669 1449 ntBASIC19.72■□□□□ 0.75
CTC1Q2NKJ3 AF238378.1-201ENST00000526806 358 ntBASIC19.72■□□□□ 0.75
CTC1Q2NKJ3 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
CTC1Q2NKJ3 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC19.72■□□□□ 0.75
CTC1Q2NKJ3 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CTC1Q2NKJ3 AP001005.1-201ENST00000571755 1248 ntBASIC19.72■□□□□ 0.75
CTC1Q2NKJ3 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CTC1Q2NKJ3 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CTC1Q2NKJ3 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
CTC1Q2NKJ3 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CTC1Q2NKJ3 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC19.72■□□□□ 0.75
CTC1Q2NKJ3 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CTC1Q2NKJ3 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CTC1Q2NKJ3 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.71■□□□□ 0.75
CTC1Q2NKJ3 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CTC1Q2NKJ3 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CTC1Q2NKJ3 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CTC1Q2NKJ3 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
CTC1Q2NKJ3 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CTC1Q2NKJ3 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CTC1Q2NKJ3 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CTC1Q2NKJ3 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CTC1Q2NKJ3 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CTC1Q2NKJ3 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CTC1Q2NKJ3 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC19.71■□□□□ 0.75
CTC1Q2NKJ3 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CTC1Q2NKJ3 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC19.71■□□□□ 0.75
CTC1Q2NKJ3 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CTC1Q2NKJ3 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms