Protein–RNA interactions for Protein: Q01850

CDR2, Cerebellar degeneration-related protein 2, humanhuman

Predictions only

Length 454 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2Q01850 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
CDR2Q01850 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
CDR2Q01850 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
CDR2Q01850 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDR2Q01850 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDR2Q01850 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDR2Q01850 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDR2Q01850 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CDR2Q01850 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDR2Q01850 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDR2Q01850 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CDR2Q01850 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CDR2Q01850 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDR2Q01850 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC19.7■□□□□ 0.74
CDR2Q01850 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CDR2Q01850 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDR2Q01850 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
CDR2Q01850 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC19.7■□□□□ 0.74
CDR2Q01850 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC19.7■□□□□ 0.74
CDR2Q01850 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDR2Q01850 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CDR2Q01850 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC19.7■□□□□ 0.74
CDR2Q01850 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC19.7■□□□□ 0.74
CDR2Q01850 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CDR2Q01850 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC19.7■□□□□ 0.74
CDR2Q01850 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDR2Q01850 AC010653.2-201ENST00000623505 997 ntBASIC19.7■□□□□ 0.74
CDR2Q01850 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
CDR2Q01850 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDR2Q01850 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC19.7■□□□□ 0.74
CDR2Q01850 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC19.7■□□□□ 0.74
CDR2Q01850 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CDR2Q01850 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDR2Q01850 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDR2Q01850 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDR2Q01850 NOC2LP1-202ENST00000452600 2235 ntBASIC19.7■□□□□ 0.74
CDR2Q01850 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDR2Q01850 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19.69■□□□□ 0.74
CDR2Q01850 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
CDR2Q01850 KRT8P9-201ENST00000558927 1449 ntBASIC19.69■□□□□ 0.74
CDR2Q01850 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDR2Q01850 AC093677.2-201ENST00000600169 1863 ntBASIC19.69■□□□□ 0.74
CDR2Q01850 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDR2Q01850 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDR2Q01850 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDR2Q01850 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
CDR2Q01850 SNCG-201ENST00000348795 684 ntTSL 2 BASIC19.69■□□□□ 0.74
CDR2Q01850 ILF2-202ENST00000368681 726 ntTSL 2 BASIC19.69■□□□□ 0.74
CDR2Q01850 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
CDR2Q01850 PHB2-202ENST00000440277 996 ntTSL 5 BASIC19.69■□□□□ 0.74
CDR2Q01850 EGLN1P1-201ENST00000531623 762 ntBASIC19.69■□□□□ 0.74
CDR2Q01850 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC19.69■□□□□ 0.74
CDR2Q01850 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDR2Q01850 CYP51A1P1-201ENST00000492267 1507 ntBASIC19.69■□□□□ 0.74
CDR2Q01850 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CDR2Q01850 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDR2Q01850 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDR2Q01850 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.69■□□□□ 0.74
CDR2Q01850 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CDR2Q01850 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDR2Q01850 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CDR2Q01850 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC19.69■□□□□ 0.74
CDR2Q01850 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC19.69■□□□□ 0.74
CDR2Q01850 KRT8P7-201ENST00000533003 1432 ntBASIC19.68■□□□□ 0.74
CDR2Q01850 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.68■□□□□ 0.74
CDR2Q01850 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC19.68■□□□□ 0.74
CDR2Q01850 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDR2Q01850 CYP2D8P-201ENST00000433633 1490 ntBASIC19.68■□□□□ 0.74
CDR2Q01850 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CDR2Q01850 ESPNP-201ENST00000270691 2015 ntBASIC19.68■□□□□ 0.74
CDR2Q01850 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDR2Q01850 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC19.68■□□□□ 0.74
CDR2Q01850 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDR2Q01850 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC19.68■□□□□ 0.74
CDR2Q01850 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDR2Q01850 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
CDR2Q01850 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
CDR2Q01850 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC19.68■□□□□ 0.74
CDR2Q01850 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC19.68■□□□□ 0.74
CDR2Q01850 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDR2Q01850 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDR2Q01850 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC19.68■□□□□ 0.74
CDR2Q01850 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC19.68■□□□□ 0.74
CDR2Q01850 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDR2Q01850 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC19.68■□□□□ 0.74
CDR2Q01850 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDR2Q01850 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDR2Q01850 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CDR2Q01850 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC19.67■□□□□ 0.74
CDR2Q01850 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CDR2Q01850 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDR2Q01850 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDR2Q01850 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDR2Q01850 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDR2Q01850 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
CDR2Q01850 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDR2Q01850 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
CDR2Q01850 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
CDR2Q01850 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDR2Q01850 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms