Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 SNX5-210ENST00000481323 562 ntTSL 3 BASIC16.29■□□□□ 0.2
NKX6-1P78426 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
NKX6-1P78426 ZNF444P1-201ENST00000559497 298 ntBASIC16.29■□□□□ 0.2
NKX6-1P78426 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC16.29■□□□□ 0.2
NKX6-1P78426 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC16.29■□□□□ 0.2
NKX6-1P78426 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC16.29■□□□□ 0.2
NKX6-1P78426 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC16.29■□□□□ 0.2
NKX6-1P78426 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC16.29■□□□□ 0.2
NKX6-1P78426 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
NKX6-1P78426 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NKX6-1P78426 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NKX6-1P78426 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
NKX6-1P78426 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NKX6-1P78426 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
NKX6-1P78426 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC16.29■□□□□ 0.2
NKX6-1P78426 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC16.29■□□□□ 0.2
NKX6-1P78426 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
NKX6-1P78426 UBQLN4P1-201ENST00000461599 1801 ntBASIC16.29■□□□□ 0.2
NKX6-1P78426 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
NKX6-1P78426 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
NKX6-1P78426 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NKX6-1P78426 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC16.28■□□□□ 0.2
NKX6-1P78426 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NKX6-1P78426 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NKX6-1P78426 AC005082.1-201ENST00000413042 2259 ntBASIC16.28■□□□□ 0.2
NKX6-1P78426 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC16.28■□□□□ 0.2
NKX6-1P78426 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
NKX6-1P78426 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NKX6-1P78426 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC16.28■□□□□ 0.2
NKX6-1P78426 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
NKX6-1P78426 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NKX6-1P78426 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC16.28■□□□□ 0.2
NKX6-1P78426 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
NKX6-1P78426 IRF5-214ENST00000613821 595 ntTSL 5 BASIC16.28■□□□□ 0.2
NKX6-1P78426 AC012313.10-201ENST00000623509 926 ntBASIC16.28■□□□□ 0.2
NKX6-1P78426 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NKX6-1P78426 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NKX6-1P78426 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
NKX6-1P78426 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NKX6-1P78426 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC16.28■□□□□ 0.2
NKX6-1P78426 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NKX6-1P78426 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC16.28■□□□□ 0.2
NKX6-1P78426 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NKX6-1P78426 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NKX6-1P78426 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NKX6-1P78426 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC16.28■□□□□ 0.2
NKX6-1P78426 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC16.27■□□□□ 0.2
NKX6-1P78426 FP475955.4-201ENST00000623131 1990 ntBASIC16.27■□□□□ 0.2
NKX6-1P78426 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NKX6-1P78426 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.2
NKX6-1P78426 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NKX6-1P78426 AR-207ENST00000612010 3896 ntTSL 5 BASIC16.27■□□□□ 0.2
NKX6-1P78426 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
NKX6-1P78426 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC16.27■□□□□ 0.2
NKX6-1P78426 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC16.27■□□□□ 0.2
NKX6-1P78426 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NKX6-1P78426 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NKX6-1P78426 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC16.27■□□□□ 0.2
NKX6-1P78426 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NKX6-1P78426 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC16.27■□□□□ 0.2
NKX6-1P78426 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NKX6-1P78426 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NKX6-1P78426 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
NKX6-1P78426 Telomerase-vert.1-201ENST00000363312 438 ntBASIC16.27■□□□□ 0.2
NKX6-1P78426 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC16.27■□□□□ 0.2
NKX6-1P78426 MIR4674-201ENST00000582457 87 ntBASIC16.27■□□□□ 0.2
NKX6-1P78426 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC16.27■□□□□ 0.2
NKX6-1P78426 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NKX6-1P78426 AC004408.2-201ENST00000623613 2777 ntBASIC16.27■□□□□ 0.2
NKX6-1P78426 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
NKX6-1P78426 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
NKX6-1P78426 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
NKX6-1P78426 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
NKX6-1P78426 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
NKX6-1P78426 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
NKX6-1P78426 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
NKX6-1P78426 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
NKX6-1P78426 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
NKX6-1P78426 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC16.26■□□□□ 0.19
NKX6-1P78426 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
NKX6-1P78426 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
NKX6-1P78426 TNXA-203ENST00000507684 2038 ntBASIC16.26■□□□□ 0.19
NKX6-1P78426 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
NKX6-1P78426 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
NKX6-1P78426 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC16.26■□□□□ 0.19
NKX6-1P78426 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
NKX6-1P78426 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC16.26■□□□□ 0.19
NKX6-1P78426 WAC-202ENST00000347934 2839 ntTSL 5 BASIC16.26■□□□□ 0.19
NKX6-1P78426 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
NKX6-1P78426 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NKX6-1P78426 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC16.26■□□□□ 0.19
NKX6-1P78426 PHB2-202ENST00000440277 996 ntTSL 5 BASIC16.26■□□□□ 0.19
NKX6-1P78426 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC16.26■□□□□ 0.19
NKX6-1P78426 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC16.26■□□□□ 0.19
NKX6-1P78426 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
NKX6-1P78426 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
NKX6-1P78426 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NKX6-1P78426 KRT8P45-201ENST00000414328 1447 ntBASIC16.26■□□□□ 0.19
NKX6-1P78426 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
NKX6-1P78426 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms