Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
WNT3AP56704 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
WNT3AP56704 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
WNT3AP56704 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
WNT3AP56704 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
WNT3AP56704 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
WNT3AP56704 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.67■□□□□ 0.58
WNT3AP56704 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
WNT3AP56704 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
WNT3AP56704 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
WNT3AP56704 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
WNT3AP56704 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
WNT3AP56704 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
WNT3AP56704 GRAMD4P1-201ENST00000435181 1110 ntBASIC18.67■□□□□ 0.58
WNT3AP56704 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC18.67■□□□□ 0.58
WNT3AP56704 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC18.67■□□□□ 0.58
WNT3AP56704 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC18.67■□□□□ 0.58
WNT3AP56704 AC104390.1-201ENST00000555663 520 ntBASIC18.67■□□□□ 0.58
WNT3AP56704 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC18.67■□□□□ 0.58
WNT3AP56704 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC18.67■□□□□ 0.58
WNT3AP56704 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC18.67■□□□□ 0.58
WNT3AP56704 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
WNT3AP56704 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
WNT3AP56704 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
WNT3AP56704 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
WNT3AP56704 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
WNT3AP56704 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
WNT3AP56704 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
WNT3AP56704 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
WNT3AP56704 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
WNT3AP56704 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.67■□□□□ 0.58
WNT3AP56704 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
WNT3AP56704 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
WNT3AP56704 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
WNT3AP56704 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
WNT3AP56704 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
WNT3AP56704 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
WNT3AP56704 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
WNT3AP56704 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
WNT3AP56704 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
WNT3AP56704 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
WNT3AP56704 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
WNT3AP56704 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.66■□□□□ 0.58
WNT3AP56704 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
WNT3AP56704 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
WNT3AP56704 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.66■□□□□ 0.58
WNT3AP56704 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC18.66■□□□□ 0.58
WNT3AP56704 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
WNT3AP56704 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
WNT3AP56704 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC18.66■□□□□ 0.58
WNT3AP56704 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC18.66■□□□□ 0.58
WNT3AP56704 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC18.66■□□□□ 0.58
WNT3AP56704 GAD2-202ENST00000376248 680 ntTSL 5 BASIC18.66■□□□□ 0.58
WNT3AP56704 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
WNT3AP56704 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
WNT3AP56704 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
WNT3AP56704 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC18.66■□□□□ 0.58
WNT3AP56704 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
WNT3AP56704 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
WNT3AP56704 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
WNT3AP56704 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
WNT3AP56704 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
WNT3AP56704 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC18.66■□□□□ 0.58
WNT3AP56704 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
WNT3AP56704 AL138966.2-201ENST00000621997 464 ntBASIC18.66■□□□□ 0.58
WNT3AP56704 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
WNT3AP56704 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
WNT3AP56704 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
WNT3AP56704 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC18.66■□□□□ 0.58
WNT3AP56704 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC18.66■□□□□ 0.58
WNT3AP56704 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
WNT3AP56704 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
WNT3AP56704 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
WNT3AP56704 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
WNT3AP56704 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
WNT3AP56704 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
WNT3AP56704 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
WNT3AP56704 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
WNT3AP56704 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
WNT3AP56704 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC18.66■□□□□ 0.58
WNT3AP56704 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
WNT3AP56704 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
WNT3AP56704 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
WNT3AP56704 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
WNT3AP56704 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
WNT3AP56704 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC18.65■□□□□ 0.58
WNT3AP56704 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
WNT3AP56704 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
WNT3AP56704 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
WNT3AP56704 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.65■□□□□ 0.58
WNT3AP56704 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
WNT3AP56704 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC18.65■□□□□ 0.58
WNT3AP56704 SNCG-201ENST00000348795 684 ntTSL 2 BASIC18.65■□□□□ 0.58
WNT3AP56704 AC211429.1-201ENST00000415277 523 ntBASIC18.65■□□□□ 0.58
WNT3AP56704 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC18.65■□□□□ 0.58
WNT3AP56704 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC18.65■□□□□ 0.58
WNT3AP56704 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC18.65■□□□□ 0.58
WNT3AP56704 AC010203.1-204ENST00000548782 407 ntBASIC18.65■□□□□ 0.58
WNT3AP56704 NEK4P2-201ENST00000580004 1012 ntBASIC18.65■□□□□ 0.58
WNT3AP56704 AC024243.1-201ENST00000609234 778 ntBASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms