Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
SMSP52788 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SMSP52788 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SMSP52788 AC018470.1-201ENST00000624790 3129 ntBASIC17.32■□□□□ 0.36
SMSP52788 LTB4R2-202ENST00000528054 3092 ntBASIC17.32■□□□□ 0.36
SMSP52788 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SMSP52788 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
SMSP52788 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SMSP52788 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
SMSP52788 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SMSP52788 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
SMSP52788 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.32■□□□□ 0.36
SMSP52788 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
SMSP52788 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SMSP52788 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
SMSP52788 GUK1-204ENST00000366721 689 ntTSL 3 BASIC17.32■□□□□ 0.36
SMSP52788 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
SMSP52788 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SMSP52788 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SMSP52788 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC17.32■□□□□ 0.36
SMSP52788 SLC25A1P2-201ENST00000430693 912 ntBASIC17.32■□□□□ 0.36
SMSP52788 FAM207BP-201ENST00000447172 505 ntBASIC17.32■□□□□ 0.36
SMSP52788 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SMSP52788 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC17.32■□□□□ 0.36
SMSP52788 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC17.32■□□□□ 0.36
SMSP52788 AL512604.3-201ENST00000569583 964 ntBASIC17.32■□□□□ 0.36
SMSP52788 DBP-204ENST00000599385 709 ntTSL 3 BASIC17.32■□□□□ 0.36
SMSP52788 AL358472.4-201ENST00000633140 710 ntBASIC17.32■□□□□ 0.36
SMSP52788 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
SMSP52788 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC17.32■□□□□ 0.36
SMSP52788 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
SMSP52788 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC17.32■□□□□ 0.36
SMSP52788 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC17.32■□□□□ 0.36
SMSP52788 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SMSP52788 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SMSP52788 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
SMSP52788 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SMSP52788 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SMSP52788 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.32■□□□□ 0.36
SMSP52788 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.32■□□□□ 0.36
SMSP52788 RCC2P6-201ENST00000526625 1557 ntBASIC17.32■□□□□ 0.36
SMSP52788 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
SMSP52788 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SMSP52788 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
SMSP52788 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SMSP52788 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SMSP52788 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.31■□□□□ 0.36
SMSP52788 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
SMSP52788 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SMSP52788 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.31■□□□□ 0.36
SMSP52788 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.31■□□□□ 0.36
SMSP52788 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
SMSP52788 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SMSP52788 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.31■□□□□ 0.36
SMSP52788 FAM8A6P-201ENST00000407496 1135 ntBASIC17.31■□□□□ 0.36
SMSP52788 AC117947.1-201ENST00000427448 529 ntBASIC17.31■□□□□ 0.36
SMSP52788 SAPCD2P2-201ENST00000431719 1174 ntBASIC17.31■□□□□ 0.36
SMSP52788 MFAP1P1-201ENST00000442257 1255 ntBASIC17.31■□□□□ 0.36
SMSP52788 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC17.31■□□□□ 0.36
SMSP52788 FDX2-206ENST00000492239 773 ntTSL 2 BASIC17.31■□□□□ 0.36
SMSP52788 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC17.31■□□□□ 0.36
SMSP52788 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC17.31■□□□□ 0.36
SMSP52788 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC17.31■□□□□ 0.36
SMSP52788 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC17.31■□□□□ 0.36
SMSP52788 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.31■□□□□ 0.36
SMSP52788 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.31■□□□□ 0.36
SMSP52788 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC17.31■□□□□ 0.36
SMSP52788 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
SMSP52788 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SMSP52788 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SMSP52788 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SMSP52788 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC17.31■□□□□ 0.36
SMSP52788 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
SMSP52788 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SMSP52788 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SMSP52788 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SMSP52788 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SMSP52788 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SMSP52788 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SMSP52788 HTR7P1-202ENST00000624664 4411 ntBASIC17.31■□□□□ 0.36
SMSP52788 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SMSP52788 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
SMSP52788 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SMSP52788 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
SMSP52788 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.3■□□□□ 0.36
SMSP52788 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SMSP52788 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SMSP52788 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SMSP52788 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SMSP52788 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
SMSP52788 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
SMSP52788 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC17.3■□□□□ 0.36
SMSP52788 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC17.3■□□□□ 0.36
SMSP52788 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SMSP52788 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC17.3■□□□□ 0.36
SMSP52788 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
SMSP52788 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC17.3■□□□□ 0.36
SMSP52788 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC17.3■□□□□ 0.36
SMSP52788 AC010653.2-201ENST00000623505 997 ntBASIC17.3■□□□□ 0.36
SMSP52788 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms