Protein–RNA interactions for Protein: P51861

CDR1, Cerebellar degeneration-related antigen 1, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1P51861 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDR1P51861 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDR1P51861 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC20.21■□□□□ 0.83
CDR1P51861 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC20.21■□□□□ 0.83
CDR1P51861 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDR1P51861 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDR1P51861 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CDR1P51861 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CDR1P51861 SLC25A1P2-201ENST00000430693 912 ntBASIC20.21■□□□□ 0.83
CDR1P51861 AC008622.2-201ENST00000617006 1229 ntBASIC20.21■□□□□ 0.83
CDR1P51861 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
CDR1P51861 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDR1P51861 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDR1P51861 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDR1P51861 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDR1P51861 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC20.21■□□□□ 0.83
CDR1P51861 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDR1P51861 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDR1P51861 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDR1P51861 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
CDR1P51861 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC20.2■□□□□ 0.82
CDR1P51861 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CDR1P51861 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC20.2■□□□□ 0.82
CDR1P51861 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDR1P51861 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC20.2■□□□□ 0.82
CDR1P51861 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC20.2■□□□□ 0.82
CDR1P51861 AC117947.1-201ENST00000427448 529 ntBASIC20.2■□□□□ 0.82
CDR1P51861 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CDR1P51861 GLRB-205ENST00000512619 728 ntTSL 3 BASIC20.2■□□□□ 0.82
CDR1P51861 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC20.2■□□□□ 0.82
CDR1P51861 AL353719.1-201ENST00000566847 864 ntBASIC20.2■□□□□ 0.82
CDR1P51861 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC20.2■□□□□ 0.82
CDR1P51861 MIR4674-201ENST00000582457 87 ntBASIC20.2■□□□□ 0.82
CDR1P51861 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CDR1P51861 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC20.2■□□□□ 0.82
CDR1P51861 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDR1P51861 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDR1P51861 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDR1P51861 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CDR1P51861 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDR1P51861 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC20.2■□□□□ 0.82
CDR1P51861 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CDR1P51861 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDR1P51861 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC20.2■□□□□ 0.82
CDR1P51861 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CDR1P51861 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CDR1P51861 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CDR1P51861 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CDR1P51861 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CDR1P51861 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC20.19■□□□□ 0.82
CDR1P51861 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDR1P51861 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDR1P51861 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDR1P51861 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDR1P51861 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDR1P51861 LGALS8-AS1-201ENST00000487567 1457 ntBASIC20.19■□□□□ 0.82
CDR1P51861 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC20.19■□□□□ 0.82
CDR1P51861 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDR1P51861 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
CDR1P51861 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDR1P51861 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
CDR1P51861 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
CDR1P51861 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDR1P51861 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDR1P51861 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC20.19■□□□□ 0.82
CDR1P51861 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDR1P51861 HMGA1P5-201ENST00000412453 271 ntBASIC20.19■□□□□ 0.82
CDR1P51861 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDR1P51861 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC20.19■□□□□ 0.82
CDR1P51861 AL023973.1-201ENST00000624619 620 ntBASIC20.19■□□□□ 0.82
CDR1P51861 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDR1P51861 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDR1P51861 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC20.19■□□□□ 0.82
CDR1P51861 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CDR1P51861 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC20.19■□□□□ 0.82
CDR1P51861 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
CDR1P51861 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CDR1P51861 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CDR1P51861 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDR1P51861 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC20.18■□□□□ 0.82
CDR1P51861 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDR1P51861 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
CDR1P51861 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDR1P51861 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
CDR1P51861 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDR1P51861 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CDR1P51861 Telomerase-vert.1-201ENST00000363312 438 ntBASIC20.18■□□□□ 0.82
CDR1P51861 BUB3-202ENST00000368859 667 ntTSL 3 BASIC20.18■□□□□ 0.82
CDR1P51861 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CDR1P51861 AK4P3-201ENST00000418260 669 ntBASIC20.18■□□□□ 0.82
CDR1P51861 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC20.18■□□□□ 0.82
CDR1P51861 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
CDR1P51861 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC20.18■□□□□ 0.82
CDR1P51861 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC20.18■□□□□ 0.82
CDR1P51861 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC20.18■□□□□ 0.82
CDR1P51861 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDR1P51861 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
CDR1P51861 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDR1P51861 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC20.18■□□□□ 0.82
CDR1P51861 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms