Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
SRP9P49458 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC16.41■□□□□ 0.22
SRP9P49458 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC16.41■□□□□ 0.22
SRP9P49458 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC16.41■□□□□ 0.22
SRP9P49458 Z99916.2-201ENST00000604037 246 ntBASIC16.41■□□□□ 0.22
SRP9P49458 CD177P1-201ENST00000606252 935 ntBASIC16.41■□□□□ 0.22
SRP9P49458 LINC00896-202ENST00000609602 2128 ntBASIC16.41■□□□□ 0.22
SRP9P49458 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC16.41■□□□□ 0.22
SRP9P49458 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC16.41■□□□□ 0.22
SRP9P49458 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC16.41■□□□□ 0.22
SRP9P49458 AL031985.4-201ENST00000642138 673 ntBASIC16.41■□□□□ 0.22
SRP9P49458 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SRP9P49458 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SRP9P49458 PCDHA12-202ENST00000613593 2588 ntBASIC16.41■□□□□ 0.22
SRP9P49458 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SRP9P49458 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
SRP9P49458 BCL2-203ENST00000589955 5011 ntBASIC16.41■□□□□ 0.22
SRP9P49458 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC16.41■□□□□ 0.22
SRP9P49458 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
SRP9P49458 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
SRP9P49458 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
SRP9P49458 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SRP9P49458 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
SRP9P49458 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC16.41■□□□□ 0.22
SRP9P49458 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
SRP9P49458 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SRP9P49458 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SRP9P49458 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
SRP9P49458 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SRP9P49458 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SRP9P49458 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC16.41■□□□□ 0.22
SRP9P49458 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SRP9P49458 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
SRP9P49458 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SRP9P49458 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
SRP9P49458 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SRP9P49458 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
SRP9P49458 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SRP9P49458 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC16.4■□□□□ 0.22
SRP9P49458 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SRP9P49458 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SRP9P49458 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC16.4■□□□□ 0.22
SRP9P49458 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
SRP9P49458 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.4■□□□□ 0.22
SRP9P49458 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
SRP9P49458 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
SRP9P49458 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SRP9P49458 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SRP9P49458 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
SRP9P49458 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SRP9P49458 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SRP9P49458 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SRP9P49458 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC16.4■□□□□ 0.22
SRP9P49458 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC16.4■□□□□ 0.22
SRP9P49458 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SRP9P49458 AC093827.2-201ENST00000512654 315 ntBASIC16.4■□□□□ 0.22
SRP9P49458 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC16.4■□□□□ 0.22
SRP9P49458 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC16.4■□□□□ 0.22
SRP9P49458 AC066615.1-201ENST00000640911 628 ntBASIC16.4■□□□□ 0.22
SRP9P49458 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC16.4■□□□□ 0.22
SRP9P49458 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC16.4■□□□□ 0.22
SRP9P49458 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC16.4■□□□□ 0.22
SRP9P49458 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
SRP9P49458 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
SRP9P49458 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SRP9P49458 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SRP9P49458 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
SRP9P49458 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
SRP9P49458 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
SRP9P49458 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
SRP9P49458 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC16.4■□□□□ 0.22
SRP9P49458 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
SRP9P49458 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC16.4■□□□□ 0.22
SRP9P49458 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
SRP9P49458 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SRP9P49458 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
SRP9P49458 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SRP9P49458 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
SRP9P49458 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
SRP9P49458 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SRP9P49458 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
SRP9P49458 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC16.39■□□□□ 0.21
SRP9P49458 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SRP9P49458 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SRP9P49458 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.39■□□□□ 0.21
SRP9P49458 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
SRP9P49458 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SRP9P49458 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SRP9P49458 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
SRP9P49458 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SRP9P49458 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
SRP9P49458 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
SRP9P49458 AC126763.1-201ENST00000552015 2118 ntBASIC16.39■□□□□ 0.21
SRP9P49458 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SRP9P49458 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC16.39■□□□□ 0.21
SRP9P49458 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SRP9P49458 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SRP9P49458 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
SRP9P49458 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
SRP9P49458 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms