Protein–RNA interactions for Protein: P49454

CENPF, Centromere protein F, humanhuman

Predictions only

Length 3,210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPFP49454 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC20.8■□□□□ 0.92
CENPFP49454 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC20.8■□□□□ 0.92
CENPFP49454 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
CENPFP49454 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CENPFP49454 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CENPFP49454 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CENPFP49454 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CENPFP49454 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC20.79■□□□□ 0.92
CENPFP49454 AC083906.6-201ENST00000641366 219 ntBASIC20.79■□□□□ 0.92
CENPFP49454 AC079781.4-201ENST00000641908 219 ntBASIC20.79■□□□□ 0.92
CENPFP49454 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CENPFP49454 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CENPFP49454 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC20.79■□□□□ 0.92
CENPFP49454 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC20.79■□□□□ 0.92
CENPFP49454 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC20.79■□□□□ 0.92
CENPFP49454 AC021087.4-201ENST00000563761 564 ntBASIC20.79■□□□□ 0.92
CENPFP49454 Z83851.2-201ENST00000609564 659 ntBASIC20.79■□□□□ 0.92
CENPFP49454 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CENPFP49454 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
CENPFP49454 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CENPFP49454 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.79■□□□□ 0.92
CENPFP49454 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC20.79■□□□□ 0.92
CENPFP49454 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CENPFP49454 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
CENPFP49454 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC20.78■□□□□ 0.92
CENPFP49454 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
CENPFP49454 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CENPFP49454 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CENPFP49454 RCC2P3-201ENST00000418112 1537 ntBASIC20.78■□□□□ 0.92
CENPFP49454 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.78■□□□□ 0.92
CENPFP49454 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CENPFP49454 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC20.78■□□□□ 0.92
CENPFP49454 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CENPFP49454 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CENPFP49454 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.78■□□□□ 0.92
CENPFP49454 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
CENPFP49454 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.78■□□□□ 0.92
CENPFP49454 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CENPFP49454 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
CENPFP49454 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC20.78■□□□□ 0.92
CENPFP49454 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC20.78■□□□□ 0.92
CENPFP49454 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC20.78■□□□□ 0.92
CENPFP49454 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CENPFP49454 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CENPFP49454 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC20.78■□□□□ 0.92
CENPFP49454 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
CENPFP49454 AC012676.1-201ENST00000574705 1949 ntBASIC20.78■□□□□ 0.92
CENPFP49454 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CENPFP49454 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
CENPFP49454 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CENPFP49454 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.78■□□□□ 0.92
CENPFP49454 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
CENPFP49454 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC20.78■□□□□ 0.92
CENPFP49454 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CENPFP49454 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC20.78■□□□□ 0.92
CENPFP49454 MTDHP3-201ENST00000594186 672 ntBASIC20.78■□□□□ 0.92
CENPFP49454 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC20.78■□□□□ 0.92
CENPFP49454 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CENPFP49454 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC20.77■□□□□ 0.92
CENPFP49454 RBM17P3-201ENST00000417687 1192 ntBASIC20.77■□□□□ 0.92
CENPFP49454 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC20.77■□□□□ 0.92
CENPFP49454 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC20.77■□□□□ 0.92
CENPFP49454 TP73-AS1-210ENST00000637775 1455 ntBASIC20.77■□□□□ 0.92
CENPFP49454 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CENPFP49454 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CENPFP49454 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CENPFP49454 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC20.77■□□□□ 0.92
CENPFP49454 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CENPFP49454 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC20.77■□□□□ 0.92
CENPFP49454 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20.77■□□□□ 0.92
CENPFP49454 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
CENPFP49454 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.77■□□□□ 0.91
CENPFP49454 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
CENPFP49454 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC20.76■□□□□ 0.91
CENPFP49454 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC20.76■□□□□ 0.91
CENPFP49454 CCDC74BP1-201ENST00000508880 1123 ntBASIC20.76■□□□□ 0.91
CENPFP49454 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
CENPFP49454 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC20.76■□□□□ 0.91
CENPFP49454 PNMT-203ENST00000581428 677 ntTSL 2 BASIC20.76■□□□□ 0.91
CENPFP49454 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC20.76■□□□□ 0.91
CENPFP49454 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CENPFP49454 INTS4P1-201ENST00000438455 1935 ntBASIC20.76■□□□□ 0.91
CENPFP49454 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CENPFP49454 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC20.76■□□□□ 0.91
CENPFP49454 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CENPFP49454 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.76■□□□□ 0.91
CENPFP49454 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CENPFP49454 PAN3-AS1-201ENST00000563843 1351 ntBASIC20.76■□□□□ 0.91
CENPFP49454 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CENPFP49454 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CENPFP49454 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC20.76■□□□□ 0.91
CENPFP49454 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC20.76■□□□□ 0.91
CENPFP49454 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC20.76■□□□□ 0.91
CENPFP49454 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC20.76■□□□□ 0.91
CENPFP49454 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC20.76■□□□□ 0.91
CENPFP49454 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CENPFP49454 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
CENPFP49454 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
CENPFP49454 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CENPFP49454 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms